Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02237 ATGGCACAaccaccttcttcttcttcttccattctACACATAACCATCATCACACTAACATGCCACTTCTTCCTTTTCACTCAAGCCACAAAAAATCCAGATTTCCATTCATTACTTGCATTCAAAATCACTTCCGACACAtctaacaaactcacatcatgGAACATTACCACAGACCTATGCACATGGTATGGTGTTTCCTGTCTTAGAAACCGTGTCTCCCGCCTTGTCCTTGAAAACCTCGACCTCCACGGCTCCGTTGAACCGTTAACATCACTCACTCAGCTCCGTGTTCTCAGCCTTAAACGTAATAGTTTTAATGGTCCTATTCCAAATCTCTCCAACCTCACTTCATTAAGACTTCTCTTCCTCTCTTACAACAACTTCTCCGGTGAGTTCCCGGAATCACTTACCTCGTTAACCCGCCTATATCGTCTTGATCTTTCTCATAACAATATCTCCGGTAAGATTCCGGTGAATGTCAACAGTTTGTCTCGCCTCCTCACTCTTCGCCTTGACGGAAACCAAATTGAAGGACACATTCCAAATATAAACCTCTCTTACCTCCAAGACTTCAATGTCTCTGGTAACATTCTCTCTGGTCGAATACCGGAATTACTTTCGGGTTTTCCAGATTCGTCTTTTGCACAAAACCCGTCTCTTTGTGGTACACCATTGCAAAAATGTAAAGATGTTCCTGCCCTTGCTTCGTCGTTGGTTCCACTTCCATCTTCTTCGGGTTCAATGCCAGGAAATAAGTCCCATAGAAATGGAGGTCCAAGAATGGGGACATTGGTCTTAATTACCATTATCCTCGGCGATGTATTAGTACTCGCCATTGTTTCATTGCTTCTCTACTGCTACTTCTGGCGCAATCACGCTAACAAGATGGAGGAAAGAAAAGAAGCAGAGTCGAATTCAAAGAGTTTAGAGGGTGAAAATCAAAAGATGGTTTATATTGGGCAACAAGGGTTGGACAAAGGTAATAAAATGGTGTTTTTCGAAGGGGCGAAGAGGTTTGAATTAGAGGATTTGCTTCGTGCTTCAGCCGAAATGTTGGGGAAAGGTATACTTGGCACTGTCTACAAAGCTGTTCTTGATGATGGAACTGTTGTTGCTGTGAAGAGATTGAAGGAGGTTCAGATTGGAGGGAAGAGAGAATTCGAGCAGCGAATGGAAGTTCTTGGAAAGTTAAGACACTCTAACATTGTTAGCTTGAAGGCTTATTATTTTGCAAGGGATGAAAAATTGCTTGTCTTTGATTATATGGTTAATGGTAGCTTGTTTTGGCTCCTTCATGGTAACCGAGGACCAGGGCGAACCCCACTTGATTGGACCACAAGGCTAAAGATAGCATCTGGAGCAGCACAAGGTGTAGCCTTCATTCACAACCACAACAATAATAATCTCATCCACGGTAACATCAAATCCACAAACGTCCTAATTGGCGTCTCTGGAAATGCACACGTGGCAGATTTTGGTCTCTCTATTTTCACCACCCCatcaaacagaaaatcaaacGGTTACCGCGCTCCAGAGTCATCAGACGGTCGAAAACAATCTCAAAAGTCTGACGTGTATGCTTTTGGTGTTTTGTTAATGGAGATATTAACAGGGAAATGTCCCTCCGCCGTAGACGGAGGAACTGTGGTGGAGCTTCCTAAGTGGGTCCAGTCAGTGGTTAAAGAGGAATGGACTGCTGAGGTTTTTGATCTTGAGCTGATGAGGTATAAAGATGCTGAGGAGGATATGGTGACGTTGTTGCAGATTGCGTTGACGTGTACTTCGATTGTACCTGATCAACGGCCTAAAATGAGCCACGTGGTTAAGAGGATTGAGGAGTTGCGTGATGTGGCTTCGTGTCATGACACGTTGGATTCGGCTTATGATTCGCCTTTGTCTGAAGATGCAACTGGAGGAGGTGGAACTATTCACTAA 1938 0.4252 MAQPPSSSSSILHITIITLTCHFFLFTQATKNPDFHSLLAFKITSDTSNKLTSWNITTDLCTWYGVSCLRNRVSRLVLENLDLHGSVEPLTSLTQLRVLSLKRNSFNGPIPNLSNLTSLRLLFLSYNNFSGEFPESLTSLTRLYRLDLSHNNISGKIPVNVNSLSRLLTLRLDGNQIEGHIPNINLSYLQDFNVSGNILSGRIPELLSGFPDSSFAQNPSLCGTPLQKCKDVPALASSLVPLPSSSGSMPGNKSHRNGGPRMGTLVLITIILGDVLVLAIVSLLLYCYFWRNHANKMEERKEAESNSKSLEGENQKMVYIGQQGLDKGNKMVFFEGAKRFELEDLLRASAEMLGKGILGTVYKAVLDDGTVVAVKRLKEVQIGGKREFEQRMEVLGKLRHSNIVSLKAYYFARDEKLLVFDYMVNGSLFWLLHGNRGPGRTPLDWTTRLKIASGAAQGVAFIHNHNNNNLIHGNIKSTNVLIGVSGNAHVADFGLSIFTTPSNRKSNGYRAPESSDGRKQSQKSDVYAFGVLLMEILTGKCPSAVDGGTVVELPKWVQSVVKEEWTAEVFDLELMRYKDAEEDMVTLLQIALTCTSIVPDQRPKMSHVVKRIEELRDVASCHDTLDSAYDSPLSEDATGGGGTIH 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02237 645 Gene3D Ribonuclease Inhibitor 26 90 IPR032675 -
Tsu05g02237 645 SUPERFAMILY Protein kinase-like (PK-like) 351 612 IPR011009 -
Tsu05g02237 645 Gene3D Ribonuclease Inhibitor 91 233 IPR032675 -
Tsu05g02237 645 SUPERFAMILY L domain-like 51 226 - -
Tsu05g02237 645 Gene3D Transferase(Phosphotransferase) domain 1 423 630 - -
Tsu05g02237 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 628 - -
Tsu05g02237 645 Pfam Protein tyrosine and serine/threonine kinase 351 611 IPR001245 GO:0004672|GO:0006468
Tsu05g02237 645 ProSiteProfiles Protein kinase domain profile. 347 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02237 645 Gene3D Phosphorylase Kinase; domain 1 318 422 - -
Tsu05g02237 645 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Tsu05g02237 645 PANTHER - 27 628 - -
Tsu05g02237 645 Coils Coil 293 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02237 Tsu-Chr5 28998418 29003854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02237 34 640 Receptor kinase-like Gene Family AT1G68400 62.117 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tsu05g02237 PK_Tyr_Ser-Thr 9.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02237 - - adu:107467433 805.438