Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02213 ATGGAGTATATAAGTATAATCAAGTTTCATAGGATCTATCCATTCAAGGTGAAGAAATCAAATCCAATAATGGATTACACAACCCTTATGCTACTCATATCCATTTTGTggacaattatttttttcttcatcactAGCCATGGAACCAAAACCTCTAAATCATCATCTTCCAAGCTTCCACCAGGTCCTTATCCTTATCCTATCATTGGAAACCTCTTGGAATTAGTTGGCACAAACCCTTTAGATGCATTCACTCACCTTTCAAAAATTTATGGACCTATAATTACTCTTAAATTGGGAACTTCAACAACCATAGTGATTTCTTCTCCACAAATAGCTAAAGAAACACTTCACACATATGACATAGTTTTTTCAAACAGGACAGTTCCAGATGCTGCAAAGACACTTGATCATCACAAAGTTTCAATGGTATGGATGCAACCATCATCTAAATGGAGGACTCTTAGAAGAGCTTGTGCCACAAAAATATTCTCAACTCAACAACTTGATTCAACTAAATTCCATCGCAAGAGCAAGGTGCAAGACTTGATTAATTATGTGCATAAGTGTTGTCAGAAAGGTGAAGCCTTTGATTTTGGTGAGGTTGTTCTTGCAACTGTTATGAATTCAATATCAGAAACTTTCATTTCTatggatttatttcattacTATGGTTCTAGTGATGATGTTAAGAAATCAAAGGAGTTTAAAGAAATGGTACATGGTATTATGGAAGAAACTGGAAGGCCTAATGTTGttaattttttcccttttttcaaAGTTTTTGATCCACAAGGTGTAAGAAAAAGGATGAGAAAACATTTTGAGAAGTTGTTAgctttttttgaagaagtgaTGGAAGAAAGAATTCGTTTAAGAGCTTCTGATCAATCTAAGGAATATAACGATGTGTTAGATTCTTTTCTGGATCTTCTCAAAGAACAGAGTTCCCAATTGTGTCGCCATGATGTCTTGCACTTATTTGCAGATTTATTTGTAGCTGGAATAGACACAACATCGACCACAGTGGAATGGGCAATGACAGAGTTGTTACATAGCCCAAGTAAACTAAAAAGGCTTAGAGAGGAAATTCAACAAATTCATGGGAAATCCGGACAAATTGAAGAATCTGATGCTTCAAATTTGCCTTATCTAAGGGCAGTAGTGAAAGAAACATTAAGGCTTCATCCACCAGTTCCATTTCTAGTACCTCACAAATCAAAAGATGATGGTGAATTAGGTGGCTTCATGATACCAAAAGATGCACAAATTCTAGTAAATGTATGGTCAATTGGAAGAGATTCAAGCATTTGGGCTAATCCAAATTCATTTGAACCTGAAAGATTTTTGAAGATTGAAACAGATTTTAAAGGTAGAGATTTTGAACTTGTTCCATTTGGTGCTGGTAGAAGAATTTGTCCTGGATTACCTTTGGCTTCAAGGTCCATTCACTACATATTGGCATCTCTTTTGTATCACTTTGATTTGAAGCTAGCTGATGAACTAAAACCTGATGATATGGATATGAGTCATATGTTTGGAGTTACATTACATAAGGCTCAACCTCTTCGAGTTGTACCCATCAAAGCTTAA 1593 0.3402 MEYISIIKFHRIYPFKVKKSNPIMDYTTLMLLISILWTIIFFFITSHGTKTSKSSSSKLPPGPYPYPIIGNLLELVGTNPLDAFTHLSKIYGPIITLKLGTSTTIVISSPQIAKETLHTYDIVFSNRTVPDAAKTLDHHKVSMVWMQPSSKWRTLRRACATKIFSTQQLDSTKFHRKSKVQDLINYVHKCCQKGEAFDFGEVVLATVMNSISETFISMDLFHYYGSSDDVKKSKEFKEMVHGIMEETGRPNVVNFFPFFKVFDPQGVRKRMRKHFEKLLAFFEEVMEERIRLRASDQSKEYNDVLDSFLDLLKEQSSQLCRHDVLHLFADLFVAGIDTTSTTVEWAMTELLHSPSKLKRLREEIQQIHGKSGQIEESDASNLPYLRAVVKETLRLHPPVPFLVPHKSKDDGELGGFMIPKDAQILVNVWSIGRDSSIWANPNSFEPERFLKIETDFKGRDFELVPFGAGRRICPGLPLASRSIHYILASLLYHFDLKLADELKPDDMDMSHMFGVTLHKAQPLRVVPIKA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02213 530 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 112 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 24 529 - -
Tsu05g02213 530 PANTHER CYTOCHROME P450 FAMILY PROTEIN 24 529 - -
Tsu05g02213 530 Gene3D Cytochrome P450 45 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 Pfam Cytochrome P450 60 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02213 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Tsu05g02213 530 SUPERFAMILY Cytochrome P450 56 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02213 Tsu-Chr5 28503473 28506969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02213 23 529 Cytochrome P450 AT2G45550 44.814 2.20e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02213 - - mtr:MTR_5g056720 675.241