Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02192 ATGCCTTATGGGGTACAAATAGATGTCGGTTCCACATCGGTTGTGAATACGCCGAAAGTAAGATTCCAATTAAAGGATGATGAATTTATCATTGAATCATGGCTGAACGTTTCAAAGGATCCAATTGTTGGAGTTGATCAAAAAGGGGAAAGCTTTTGGAAGAAGATTGGTGAAGCTTATAACAAGCATCGTGACAAGAAGTATATAGAGAGGAAACCGATGACACTAAAAAGTCGATGGCACAAAATAAATTCCACCGTTCAAAAGTTTGTTGGGTGCTACAAACAAGCTGTGGCTACACAGAAAAGTGGGAGTTTAGAGAGTGACATCATTTTAGCTGCAAAAAAGATTTTTCACcaagatgaaaaagaaaacttCACATTTGAAGATGCATGGAGATTATTGAAAGATGAACCCAAATGGCTTGCAGGACTAACGCAACCTTCCACAAAAAGGTCAAAGAATTCAGCTTCAGGAgcatattcatcttcttctaacCCACTGACACCAACGAGCACCGAATATAATCCACCTTCACCTACTTTGTTACGTCGTCCAATGGGTTAA 567 0.3704 MPYGVQIDVGSTSVVNTPKVRFQLKDDEFIIESWLNVSKDPIVGVDQKGESFWKKIGEAYNKHRDKKYIERKPMTLKSRWHKINSTVQKFVGCYKQAVATQKSGSLESDIILAAKKIFHQDEKENFTFEDAWRLLKDEPKWLAGLTQPSTKRSKNSASGAYSSSSNPLTPTSTEYNPPSPTLLRRPMG 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02192 188 MobiDBLite consensus disorder prediction 146 179 - -
Tsu05g02192 188 PANTHER OS07G0575233 PROTEIN 10 188 - -
Tsu05g02192 188 PANTHER - 10 188 - -
Tsu05g02192 188 MobiDBLite consensus disorder prediction 145 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02192 Tsu-Chr5 28133645 28134300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02192 26 188 Glutathione S-transferase Gene Family AT5G41240 36.416 2.10e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02192 - - mtr:MTR_4g083510 227.254