Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02153 ATGGCTGCTTCAGTTGACAACCGTCAGTTTCGTAACATAAACGGCGTCGTTCGCCCTTTCATCCACGACCTGAAGCCGGGATTCCCGGCAAAAATAGATTCCTTCAGCAGCGACGACGAAGAAGAAAACGACGACGGACCAGATCTCCAAGAACTAATACGTAAAACAAATGCGGAAGTTGAACCGTCCATTCTCGACCCACGCGATGAAGGAACGTTAGATAACTGGGTCACACGAAACACTTCCATGGTCCGTCTCACAGGGAAACATCCTTTCAATTCAGAACCACCACTTCCACGTCTCATGCACCATGGTTTCATAACCCCAGTTCCAATCCACTACGTTCGAAACCACGGTGCTGTCCCAAAAGCACGTTGGGAAGACTGGACTGTTGAAGTAACCGGTCTAGTAAAAAACCCAACCCGGTTCACTATGGATCAACTCGTTCGCGAGTTTCCAAGTCGTGAGTTTCCCGTTACATTAGTATGCGCTGGTAACCGTCGGAAAGAACAAAACATGGTGAAACAAAGTATTGGTTTCAATTGGGGTGCTGCAGCTGTTTCAAATTCCGTATGGCGCGGGGTTTCGTTGCGTCACGTGCTTAAACGGTGTGGGATTCACGCGCGTTCTAAGGGTGCGGTTCATGTTTGTTTTTATGGTGCTGAGGATTTACCTGGTGGTGGTGGGTCCAAATATGGTACTAGTATTAAGAGGGAATATGCTATGGATCCTTCGCGTGATGTTATACTTGCTTACATGCAGAATGGTGAGGCTTTGGCTCCGGATCACGGGTTTCCGGTTCGGGTTATTATACCCGGTTTTATTGGTGGACGTATGGTGAAATGGCTTAAACGTATTGTTGTTACTTCTGATGAATGTGATGGTCATTATCATTATAAGGATAATAGAGTACTTCCTTCTCATGTAGATGCAGAACAAGCCAATGAAGAAGGTTGGTGGTACAAGCCGGAATATATTATTAACGAGCTGAACATAAACTCAGTTATTACGACGCCGTGTCACGATGAGATCTTGCCTATAAACTCATGGACTACACAGAGGCCGTATACACTGAAAGGTTATTCATATTCCGGGGGTGGAAGAAAAGTGACACGGGTTGAGATTACAATGGATGGTGGAGAAACATGGCACGTGTGCACATTGGATCATCCTGAGAAACCTACGAAATACGGGAAGTATTGGTGCTGGTGCTTTTGGTCTTTAGAAGTAGAGGTACTCGACCTCCTTGGTACCAAAGAGATTGCTGTTCGTGCATGGGATGAGGCTCTAAACACCCAACCTGAAAACCTCATTTGGAATGTTAtgGGCATGATGAACAATTGTTGGTTTAGGGTAAAAACAAACGTGTGCAGGCCCCATAAAGGTGAAATAGGCATAGTGTTTGAACATCCAACACAACCAGGTAACCAATCAGGCGGTTGGATGGCAAAAGAAAGACACTTAGAAAGATCACAAGACACCAATCCAACTCTCAAAAAGAGTGTTTCTTCTCCATTCATGAACACAACATCAAAAACATACTCCATCTCCGAagttaaaaaacataaaacccCTGATTCTGCTTGGATTATCGTCCAGGGTCATGTCTATGATTGCACTCGCTTCCTCAAAGACCATCCCGGCGGCTCTGATAGTATCCTCATCAATGCCGGTACTGATTGTACCGATGAATTTGAAGCTATCCACTCCGACAAAGCCAAAAAATTGCTAGAAGATTATAGAATCGGGGAGCTTGTTACTACCGGTTACACTTCAGATTCATCCTCCCCAAATAACTCCATTCATGGAAATTCTGAATTTACCCATCTTGCACCAATTAAAGAAATCATGGCTCTTAACCCACGTGAGAGAATCCCATGCAAACTCATTTTAAAGACATCAATTTCACATGATGTAAGACTCTTCCGTTTTGCATTACCCTCTGAAGATCAATTACTGGGATTACCCATCGGGAAACACATTTTCTTATGTGTTACCGTCGAAGGAAAATTGATCATGCGAGCTTATACGCCAACAAGTAGCGTCGATGAAATTGGGTATTTTGATTTAGTTGTCAAAATCTACTTCAAAAATGTTCATCCCAAGTTTCCTAATGGTGGAATCATGTCTCAATATTTGGATTCACTTACAATTGGGTCCATATTGGAAGTAAAAGGCCCAGTGGGCCACATTGAATATCTTGGAAGAGGAAATTTTATGGTTCACGGGAAACAAAGGTTTGCCAAGAAGCTAACATTTTTGGCTGGTGGAACCGGGATCACACCTGTTTATCAAGTCGCGAATGCGATTCTGAAAGATGGGAATGATCGAACTGAAATGTATGTTGTCTATGCAAACCGGACCGAGGAAGATATATTATTGAAGGAAGAGTTGGATGAGTGGGCAAAGATTTATAGTGATAGGTTCAAGATTTGGTATGTTGTGGAAAATGCAAATGAAGGGTGGGGATACAGTGTGGGCTTCATTACAGAGAGTATCATGAGGGAGCATGTTCCATTGGCTGGTGAGGATACTTTGGCATTGGCTTGTGGACCACCACCAATGATTCAGTTTGCAGTACAACCTAATTTggaaaaaatggggtatgataTTAAGAAGGATTTGCTTGTGTTTTAG 2637 0.4285 MAASVDNRQFRNINGVVRPFIHDLKPGFPAKIDSFSSDDEEENDDGPDLQELIRKTNAEVEPSILDPRDEGTLDNWVTRNTSMVRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGAVPKARWEDWTVEVTGLVKNPTRFTMDQLVREFPSREFPVTLVCAGNRRKEQNMVKQSIGFNWGAAAVSNSVWRGVSLRHVLKRCGIHARSKGAVHVCFYGAEDLPGGGGSKYGTSIKREYAMDPSRDVILAYMQNGEALAPDHGFPVRVIIPGFIGGRMVKWLKRIVVTSDECDGHYHYKDNRVLPSHVDAEQANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYTLKGYSYSGGGRKVTRVEITMDGGETWHVCTLDHPEKPTKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCRPHKGEIGIVFEHPTQPGNQSGGWMAKERHLERSQDTNPTLKKSVSSPFMNTTSKTYSISEVKKHKTPDSAWIIVQGHVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIHSDKAKKLLEDYRIGELVTTGYTSDSSSPNNSIHGNSEFTHLAPIKEIMALNPRERIPCKLILKTSISHDVRLFRFALPSEDQLLGLPIGKHIFLCVTVEGKLIMRAYTPTSSVDEIGYFDLVVKIYFKNVHPKFPNGGIMSQYLDSLTIGSILEVKGPVGHIEYLGRGNFMVHGKQRFAKKLTFLAGGTGITPVYQVANAILKDGNDRTEMYVVYANRTEEDILLKEELDEWAKIYSDRFKIWYVVENANEGWGYSVGFITESIMREHVPLAGEDTLALACGPPPMIQFAVQPNLEKMGYDIKKDLLVF 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 106 122 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 260 273 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 437 450 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 327 339 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 159 170 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 170 182 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 185 200 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 399 409 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 84 98 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 276 289 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 243 259 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 424 436 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 372 384 IPR008335 GO:0016491
Tsu05g02153 878 PRINTS Eukaryotic molybdopterin domain signature 358 372 IPR008335 GO:0016491
Tsu05g02153 878 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 542 549 IPR018506 GO:0020037
Tsu05g02153 878 CDD eukary_NR_Moco 69 454 - -
Tsu05g02153 878 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 135 170 IPR022407 GO:0043546
Tsu05g02153 878 Pfam Mo-co oxidoreductase dimerisation domain 325 456 IPR005066 GO:0016491|GO:0030151
Tsu05g02153 878 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 721 870 IPR039261 -
Tsu05g02153 878 Gene3D - 729 878 IPR039261 -
Tsu05g02153 878 Gene3D - 329 504 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 719 733 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 790 801 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 846 854 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 653 664 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 674 681 - -
Tsu05g02153 878 PRINTS Cytochrome B5 reductase signature 752 771 - -
Tsu05g02153 878 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 622 734 IPR017927 GO:0016491
Tsu05g02153 878 Pfam Oxidoreductase molybdopterin binding domain 118 297 IPR000572 -
Tsu05g02153 878 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 66 327 IPR036374 -
Tsu05g02153 878 Pfam Cytochrome b5-like Heme/Steroid binding domain 517 585 IPR001199 -
Tsu05g02153 878 Gene3D Translation factors 614 728 - -
Tsu05g02153 878 PANTHER NADH-CYTOCHROME B5 REDUCTASE 41 878 IPR001834 GO:0016491
Tsu05g02153 878 PIRSF Nitr_rd_NADH 8 877 IPR012137 GO:0006809|GO:0042128|GO:0050464
Tsu05g02153 878 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 509 589 IPR036400 -
Tsu05g02153 878 CDD cyt_b5_reduct_like 627 878 - -
Tsu05g02153 878 Pfam Oxidoreductase FAD-binding domain 627 733 IPR008333 -
Tsu05g02153 878 PANTHER NITRATE REDUCTASE [NADH] 2 41 878 - -
Tsu05g02153 878 Gene3D - 88 328 IPR036374 -
Tsu05g02153 878 SUPERFAMILY E set domains 329 456 IPR014756 -
Tsu05g02153 878 Pfam Oxidoreductase NAD-binding domain 753 860 IPR001433 GO:0016491
Tsu05g02153 878 SMART Cyt_b5_2 514 586 IPR001199 -
Tsu05g02153 878 Gene3D - 507 589 IPR036400 -
Tsu05g02153 878 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 511 586 IPR001199 -
Tsu05g02153 878 SUPERFAMILY Riboflavin synthase domain-like 616 734 IPR017938 -
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 752 771 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 790 801 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 822 838 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 545 555 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 706 715 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 674 681 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 787 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 846 854 IPR001709 GO:0016491
Tsu05g02153 878 PRINTS Cytochrome B5 signature 536 546 IPR001199 -
Tsu05g02153 878 PRINTS Cytochrome B5 signature 573 585 IPR001199 -
Tsu05g02153 878 PRINTS Cytochrome B5 signature 546 560 IPR001199 -
Tsu05g02153 878 PRINTS Cytochrome B5 signature 561 568 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02153 Tsu-Chr5 26840689 26846160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02153 614 869 NADPH P450 reductases AT5G17770 39.535 5.65e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02153 K10534 - gmx:100813471 1520.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02153 05 26840689 26846160 Tsu05g02153 05 26840689 26846160 ECH