Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02151 ATGAATCACATACCTCGAATTTTCGGTTATAGAAAGCAACCAACGGATATGAACTCGAAGAAGAAGGCAAAACAACCGAAGTTGGAACGCCGTAATGCCGCGAAGAATTTCAACTACGATGCTCAACCGTCGTCGCCGGAATCCACTGAGTCGGCTTCAATTCTCTGCACTCGATCTATGGATTTATACGAAAAAAAGAGCTTTCGAGTTGAAGGTGTCGACGGTGAGTTTGACATCATTTGCCGGAGCCTTGGGCTTAACGGACCAGAGGATTTCTCTATTCCGGCGGCGGCTTGGGAGGCAATGAAGGTTCGGTCTTCATCGGATGTTCTTCCGAGGCTGAATTTGTCAGATTTTGATATAACGAAGGTTAGCGAAGAAATTGGAGTTGTAGAGTGCGAAGATAGGGTTTCGATTAGAGATTCTCCTGCTGGAACTAGCGGTTGCTGCAACGCGGGCGATGGTGGTGGAAAAGATAGGGTTTCGATTAGGGTTTTTGACGAGGTTAGCAGTAGCTGTACCGGAAATGAAAATAGGGTTCCGATTAGGGGTTTTGTTGAGACGAGTGCTTGTTCCACCGGCGGCGGCGGTGGTATCAAGGGATTTAGACCTCCGATGCTAAAGCCACCGCCGGGTGTTAGGGTTTCTGTTGTAGATAATACGTGTTCCACTTGGGATCTTCTGAGGGATTTCGCTCCGGAAGGGGAAGGAAAAGAGATAGAAGAAGAGGAAGACaagaaagatgaagaagaagaagaggaagttGGTGGAGTGAGattgaagatagaagaagagGAAACTGCTGAGATTATTGGTGAGTTTTCGAGGTCGTGTTCGTTCACTACTTCACACGAAGATGATTCATCTAGCTTTACAACGGATACTAGGTCTAATAGTATATCTCCTAATGTGAGATTGAAGCCAGTTATTACTCCTGGTAGCTGGCAAAAGGGTGAGCTTTTGGGGCGTGGTTCATTTGGATCTGTATATGAAGGAATTTCTGAAGATGGATTCTTTTTTGCTGTAAAACAAGTTTCACTGCTTGATCAAGGGAGTCAGGGAAAGCAAAGTGTCGTTCAACTGGAGCACGAAATTGCACTTTTGAGTCAGTTGGAACATGAGAATATAGTTCGATACATTGGCACTGAAATGGATGAATCAAATCTATATATCTTTATCGAGTTTGTAACCAAAGGTTCGCTTTTAAGCCTCTACCGGAGATATAAACTTCGAGATTCCCAAGTATCTGCTTATACGAGACAGATTCTGAATGGTTTAAAGTATCTTCATGATCGCAATATTGTTCACAGGTGa 1314 0.4285 MNHIPRIFGYRKQPTDMNSKKKAKQPKLERRNAAKNFNYDAQPSSPESTESASILCTRSMDLYEKKSFRVEGVDGEFDIICRSLGLNGPEDFSIPAAAWEAMKVRSSSDVLPRLNLSDFDITKVSEEIGVVECEDRVSIRDSPAGTSGCCNAGDGGGKDRVSIRVFDEVSSSCTGNENRVPIRGFVETSACSTGGGGGIKGFRPPMLKPPPGVRVSVVDNTCSTWDLLRDFAPEGEGKEIEEEEDKKDEEEEEEVGGVRLKIEEEETAEIIGEFSRSCSFTTSHEDDSSSFTTDTRSNSISPNVRLKPVITPGSWQKGELLGRGSFGSVYEGISEDGFFFAVKQVSLLDQGSQGKQSVVQLEHEIALLSQLEHENIVRYIGTEMDESNLYIFIEFVTKGSLLSLYRRYKLRDSQVSAYTRQILNGLKYLHDRNIVHR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02151 437 MobiDBLite consensus disorder prediction 37 51 - -
Tsu05g02151 437 ProSiteProfiles Protein kinase domain profile. 315 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02151 437 MobiDBLite consensus disorder prediction 279 298 - -
Tsu05g02151 437 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 63 437 - -
Tsu05g02151 437 Pfam Protein kinase domain 316 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02151 437 MobiDBLite consensus disorder prediction 1 51 - -
Tsu05g02151 437 MobiDBLite consensus disorder prediction 15 34 - -
Tsu05g02151 437 MobiDBLite consensus disorder prediction 233 255 - -
Tsu05g02151 437 Gene3D Phosphorylase Kinase; domain 1 298 394 - -
Tsu05g02151 437 SUPERFAMILY Protein kinase-like (PK-like) 291 437 IPR011009 -
Tsu05g02151 437 MobiDBLite consensus disorder prediction 237 251 - -
Tsu05g02151 437 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Tsu05g02151 437 SMART serkin_6 315 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02151 437 Gene3D Transferase(Phosphotransferase) domain 1 395 437 - -
Tsu05g02151 437 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 63 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02151 Tsu-Chr5 26797573 26802320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02151 6 437 MAP Kinase Kinase Kinase AT4G08500 45.992 8.25e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tsu05g02151 Pkinase 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02151 K13414 - gmx:100819177 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02151 05 26797573 26802320 Tsu03g02025 03 21027911 21035074 PCT