Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02099 ATGAGAGAACAAAGGGTCCTTCATATTGAAGATACTAGTCAAATTGAGAGATCTAAATGGGTTTTGGATTCTCCTAATCCACCACCATTATGGAAACAAATATTTACTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAGTTGTGTTTATCATCCAAGAACAAAAGTTTTTATGGACATGCTTACTCTTTCTTGCAGAGTTTGTTTCCAATCCTTGTTTGGTTTAAAGATTACACAGCATCCAAATTTAAAGATGATTTGTTAGCTGGTTTAACTCTTGCCAGCCTTTGCATACCTCAGAGTATAGGATATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCCTATATACCAGTATTGTTCCTCCTCTTATCTATGCTGCGATGGGAAGCTCAAGAGACATTGCAATTGGACCTGTAGCTATAGTGTCTATGCTGTTATCTTCATTGGTCACAAAAGTCAGAGATCCTGTTGCTAATCCTCATGCCTATAGAGATTTTGTCTTTACTGTCACCTTCTTCACTGGAATTTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTTATGGTTGGAGCAGCCATTATTATTGGTCTTCAGCAGCTCAAGGGTCTTTTGGGGATTACTCACTTCACCACCAAAACAGATGCAATATCAGTACTGGTGTCTGTTTATAagtcattacatgaacaatttACTtctgaagaaaaaTGGAGCCCTCTGAATTTTGTCCTTGGGTGTTCTTTCTTGATTTTCCTTCTAGTTACCCGTTttatagcaagaagaaagaaaaaacttttCTGGTTACCTGCCATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTGACAAAAGCTGATAAGCAAGGAGTTAATATCATAAAGCATGTCAAAGGAGGCCTGAATCAGAGTTCAGTTCACCAGTTACAATTCCATGGTCAAAATGTTGGTCAAGCGGCCAAAATCGGATTAGTTTGTGCAGTTATTGCCCTCACTGAAGCAATGGCTGTTGGTCGATCTTTCGCTTCCATAAAGGGATACCAACTTGATGGGAACAGAGAAATGTTCTCAATGGGAATCATGAACATTGCAGGATCATTATCTTCGTGCTATGTCGCAACTGGATCTTTTTCAAGGACAGCGGTTAATTTCAGTGCAGGATGTCAAACATCAGTATCAAATATTGTGATGGCATTAACTGTGATTTTGTTCTTACAATTATTTGCAAGGCTCTTATACTACACACCTATGGCTATCCTTGCTGCTATCATCCTCTCTGCACTTCCTGGATTAATAGATATAAATGAGGCTCGCTATATCTGGAAGGTCGACAAATTAGACTTTCTTGCCTGTATTGGTGCTTTCGTTGGCGTCTTGTTTGCATCCGTAGAGATTGGTCTTCTTGTTGCAGTGACAATCTCATTTGCGAAGATACTAATACAATCAATTCGACCTGGAGTAGAAATTCTCGGAAGAGTTCCAAGAACAGAATCCTTCTGTGATGTTACTCAATATCCAATGGCCACAAGCACACCAGGCATCATAGTGATCCGCATAAGTTCCGGCTCACTGTGCTTCGCAAATGCCAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAGATGACATTCAAGAAACTTCAAAGGGAAATGTCCGAGCCATTATTATGGACATGACTAaCTTGATGAATGTTGATACCTCTGGAATTCTAGCACTTGAGGAATTGCATAAGAGGCTGCTTTCACGCGGCGTAGAATTAGCTATGGTCAACCCAAGATGGCTAGTAATTCATAAGCTCAAGCTTGCACACTTTGTGGACAAAATTGGTAAACAATGGGTTTTTCTGACTGTTGGAGAGGCCGTAGACGCGTGTCTCTCGTCTAAAATCGCTACTGCTTGA 1962 0.3899 MREQRVLHIEDTSQIERSKWVLDSPNPPPLWKQIFTSLKETLLPHGNKLCLSSKNKSFYGHAYSFLQSLFPILVWFKDYTASKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAAMGSSRDIAIGPVAIVSMLLSSLVTKVRDPVANPHAYRDFVFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMVGAAIIIGLQQLKGLLGITHFTTKTDAISVLVSVYKSLHEQFTSEEKWSPLNFVLGCSFLIFLLVTRFIARRKKKLFWLPAIAPLLSVILSTLIVYLTKADKQGVNIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNREMFSMGIMNIAGSLSSCYVATGSFSRTAVNFSAGCQTSVSNIVMALTVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAVTISFAKILIQSIRPGVEILGRVPRTESFCDVTQYPMATSTPGIIVIRISSGSLCFANANFVKERILKWVVEEDDIQETSKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLSSKIATA 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02099 653 ProSiteProfiles STAS domain profile. 539 645 IPR002645 -
Tsu05g02099 653 Pfam Sulfate permease family 84 470 IPR011547 GO:0016021
Tsu05g02099 653 PANTHER SULFATE TRANSPORTER 8 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu05g02099 653 CDD STAS_SulP_like_sulfate_transporter 523 638 - -
Tsu05g02099 653 Pfam STAS domain 523 641 IPR002645 -
Tsu05g02099 653 PANTHER SLC26A/SULP TRANSPORTER-RELATED 8 651 - -
Tsu05g02099 653 TIGRFAM sulP: sulfate permease 71 641 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu05g02099 653 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Tsu05g02099 653 Gene3D STAS domain 502 648 IPR036513 -
Tsu05g02099 653 SUPERFAMILY SpoIIaa-like 528 645 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02099 Tsu-Chr5 25253075 25257772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02099 13 650 Inorganic Solute Cotransporters AT5G10180 61.778 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02099 K17469 - gmx:100776591 1072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02099 05 25253075 25257772 Tsu05g02099 05 25253075 25257772 ECH
Tsu05g02099 05 25253075 25257772 Tsu03g02077 03 21866340 21873166 PCT