Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02079 ATGCTAATATCTTCGTTTATTTATTTCGTTCTACTTTCTATTCGTTCTAATTCTCAGAAGATTGCCATTTTGTTTACTGTGATTTTGTCTGTTGAAGCAGATCTAAGGAATATTAAAAAGAAGTATGATATGTGGAAGGCTACCGAAGAGGATTATTCAGTTGAACCAGCTGAGTCCATAAGGCCTTTATGCACCCTCATTGATGTTGGTCTTGTTAAGACCACAACCGAAAACCGCATCTTTGGTGCACTCAAGGGAGCTTTGGATGGAGCTACTTTCTTAGGCTCTCCATCTCCTGGAAGAGGAGGAAGGTATGAGGAATGTGTTGATGAGAAAAACAACCCAGCAAATGCTGAAGAAACTGCTTTTGATAAAGCGACCTGTTGCAGCAGAAAAAAAACTAGGCAAGCTGATGGCTGGACTTCATCCGATGATGAGGCAGAAACAGTAGAGCAAATCGATGAAGCAAAGTTAGAAGATCCATCGTGCAGTAGCAACCAGTGTAGAATGGAGGGTGTGAGACTATTAGGCCAAGGTTTTCAGAAAAAACGCTTCCGAGAGTTTAAGTTTGCTTGGCTCAGAGGTTTGCTTGGACATAGTCCTTGCAGATGA 612 0.4167 MLISSFIYFVLLSIRSNSQKIAILFTVILSVEADLRNIKKKYDMWKATEEDYSVEPAESIRPLCTLIDVGLVKTTTENRIFGALKGALDGATFLGSPSPGRGGRYEECVDEKNNPANAEETAFDKATCCSRKKTRQADGWTSSDDEAETVEQIDEAKLEDPSCSSNQCRMEGVRLLGQGFQKKRFREFKFAWLRGLLGHSPCR 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02079 203 PANTHER PHOSPHOPROTEIN PHOSPHATASE INHIBITOR 96 157 - -
Tsu05g02079 203 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 38 91 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Tsu05g02079 203 Gene3D - 18 94 - -
Tsu05g02079 203 PANTHER PROTEIN PHOSPHATASE INHIBITOR 96 157 IPR007062 GO:0004864|GO:0009966|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02079 Tsu-Chr5 24794391 24797084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02079 47 91 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 68.889 6.18e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02079 K02932 - gmx:100802541 73.9442