Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02077 ATGGAACGGAGCTCTTTCTCCCCGCGAAACCGGAATACCCGACCCAAGTCCGATATCTACTCTACTTTCGTAATTCACGACGATGACGACGCCGAAACTAACCGTCGCCGGAGAGCCGGTAGCGCTGAAGCTCAGGAAGATCCATACGCGACAATGGTCTTCAAAGACAACGGCAACGATGACGATGATGAAGATTCCTTTCTCCCTCCGCTTCTCAAGCGTCTCCCTAAGGATTTCGGTGGCGGAGCGTCAATGGACTACGAcgatgacgatgatgatgaatctGGCGATTTTGGTACGATGATCGTGAAAAGCGATCGGAGCCGGCAGCGAGATCGGTCTTCTTCTGGTTTAACCTCGCCGGTAGGCTCGACCTGGAAGACTGGGAGTTCTTATAAGGCGAATCATGGCgaggatgatgatgaggatgacgACGGTGGTGGATTTTCAACTTTTGTTATGCGTTCTACGGTGAAGTCTGGCGAGAGAGAGTCTGTAAGCGGAACTATGGTGCGACGGACAAGCGGTAATGATGGCGTTGGTGGTGGTTCGACCATGGAGAGGGCGATTGCAAGTATGCAAGGTGTGGGAGAGTTTGGTTTAGGGAAGCATAGGAAAGGAAGTGGATCATCACAGAACGATGAGGGAAAGCATCATTCGGTAACTAAGGTTTCGACGAGTTCGATCCCTGATAGTGTTATTAGAGAGGATCCTACCATCAAGTATGAATTACTCAATGAACTTGGGAAGGGTTCTTATGGTGCTGTTTACAAAGCCAGGGATTATAAAACCTCTGAGATGGTTGCCATCAAAGTCATATCATTATCTGAAGGAGAGGAGGGATATGAGGAAATTCGTGGTGAGATTGAGATGTTACAACAGTGTAATCATCCTAACGTTGTCCGTTATCTTGGAAGCTATCAAGGAGAAGAATATCTTTGGATAGTTATGGAATACTGTGGTGGTGGTAGTGTTGCTGATCTTATGAACGTGACTGAGGAAGCACTGGATGAGGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGATTATTTACACTCAATTTTTAAAGTCCACAGAGACATTAAAGGCGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACAAGGACTATGTCAAAGCGCAATACGTTTATTGGAACCCCTCATTGGATGGCTCCGGAAGTCATCCAGGAAAGTCGCTATGACGGAAAGGTAGATGTCTGGGCTCTTGGTGTGTCTGGAATTGAAATGGCCGAGGGTGTTCCTCCAAGATCGTCAGTGCATCCGATGAGGGTTTTATTCATGATATCCATTGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGgTCTTTATATTTCCATGATTTTGTTGCAAAATGCCTGACCAAAGAACCTCGTCTCCGCCCTGCTGCATCTGAGATGTTGAAGcacaaattttttgaaaaatggaaaGTTGGATCCGCTGCAATGTATCCAAAACTAGAAAAGGCAAGGCAAGTCAGGGCTTCAATGGCTTTACAGGTGCAAACTCTTGATCCAGCTGCAGCGGGAGATCAGGAGCCAATGCTAGCTTCCATACTAAATGACGAATATGGAGATACTGTTCCATCCAGACCTCAGAACATAAGTGTTGAGGAGGCAGCTTATATCTCATCACATGGAACTATGAGGAAGCTGCAAAAGGTGGATGAGGTTGACAATAGTGAAGGTGACTTTGGCACAATGATAGTCCATCGGGATGAATTATTTAAGACCACACAGGATACAGATTCTGCTAGTTATAAAACTGCCTTCACCAGTGGCACAGGAAGCAAACTATCTGACCCTGGGGTTGAGACTCTAAAAGTTGGCGACTTGAACACTGCCTCTTTTATAGGATCTGGTCCTACTACAGATTCCGTACAATCATCTTTACCATCTGTTAGTAATTTAACAGAGCAGAACCTCAAAACAAAAGGCACTCATCGAACACAATCTGGAATTATAAGGAACAGTACGCTTAATAAGAATGAAACAGTCAGCCGCAAATTTGCTTTACAAGATAAGCTTTGGTCCATTTATGCCGCTGGTAATACAGTGCCCATACCATTCTTAAGGGCAACCGATATATCACCTATTGCTCTGCTTTCAGACAATGTGTTTGGCGGCATGCAACAGGATACAGGTGGAACTGGAACAGTAGAAGCATTGCAAGAACTTTTTAGTGGCGACGGCCAGTCCAAAAAGGGTCGCAGAGGAATAAATGAGCAGATGCCCCTTCCTCCAAGCATTTGCCAAAGATTGACGTCTAGTTCTACTCTAATGAATTTGGGACAGGCTTTAGCTTATCATAAGATGTGTTACGAAGATATGCCACTGCAGGAGTTGCAAGCAACGCAGGAGCAGCGAACTATTCAAAATCTCTCTGACACGCTTAGAACCATTCTTCGGTTGTAG 2484 0.4412 MERSSFSPRNRNTRPKSDIYSTFVIHDDDDAETNRRRRAGSAEAQEDPYATMVFKDNGNDDDDEDSFLPPLLKRLPKDFGGGASMDYDDDDDDESGDFGTMIVKSDRSRQRDRSSSGLTSPVGSTWKTGSSYKANHGEDDDEDDDGGGFSTFVMRSTVKSGERESVSGTMVRRTSGNDGVGGGSTMERAIASMQGVGEFGLGKHRKGSGSSQNDEGKHHSVTKVSTSSIPDSVIREDPTIKYELLNELGKGSYGAVYKARDYKTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEALDEGQIAYICREALKGLDYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSGIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPAASEMLKHKFFEKWKVGSAAMYPKLEKARQVRASMALQVQTLDPAAAGDQEPMLASILNDEYGDTVPSRPQNISVEEAAYISSHGTMRKLQKVDEVDNSEGDFGTMIVHRDELFKTTQDTDSASYKTAFTSGTGSKLSDPGVETLKVGDLNTASFIGSGPTTDSVQSSLPSVSNLTEQNLKTKGTHRTQSGIIRNSTLNKNETVSRKFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVFGGMQQDTGGTGTVEALQELFSGDGQSKKGRRGINEQMPLPPSICQRLTSSSTLMNLGQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02077 827 SUPERFAMILY Protein kinase-like (PK-like) 241 497 IPR011009 -
Tsu05g02077 827 MobiDBLite consensus disorder prediction 97 113 - -
Tsu05g02077 827 ProSitePatterns Protein kinases ATP-binding region signature. 248 271 IPR017441 GO:0005524
Tsu05g02077 827 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 184 817 - -
Tsu05g02077 827 MobiDBLite consensus disorder prediction 114 132 - -
Tsu05g02077 827 MobiDBLite consensus disorder prediction 1 183 - -
Tsu05g02077 827 MobiDBLite consensus disorder prediction 153 181 - -
Tsu05g02077 827 CDD STKc_MAP4K3_like 241 496 - -
Tsu05g02077 827 ProSiteProfiles Protein kinase domain profile. 242 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02077 827 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 184 817 - -
Tsu05g02077 827 Gene3D Transferase(Phosphotransferase) domain 1 239 530 - -
Tsu05g02077 827 MobiDBLite consensus disorder prediction 199 229 - -
Tsu05g02077 827 SMART serkin_6 242 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g02077 827 MobiDBLite consensus disorder prediction 21 43 - -
Tsu05g02077 827 Pfam Protein kinase domain 242 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02077 Tsu-Chr5 24728923 24741335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02077 7 827 MAP Kinase Kinase Kinase Kinase AT1G69220 59.860 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Tsu05g02077 Pkinase 4.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02077 - - gmx:100804995 1274.23