Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02075 atgtctCCAgagtttcatcttcttctttttcctgACCTTGTTTACATTCAACCACTCACTCTCACTTTTCAAACTGCTCTTTGTTTCTTTCTCCTTGTCCTTGGTTTCCTTTTCTGGCTCACTCCAGGTGGGCTTGCTTGGGCTTTATACCATAAAGCTTCTTCTTCAGCCCATGCTGTTATCCCAGGCCCATCATTTACTGGTTTCTCTGGGCTTTTGTCAGGAAAAACTCCTCACCGTGTTTTAGCCAAACTTGCTCAGAGTCACCGTGCTAAGTCTTTAATGGCTTTTTCTATCGGTCTAACCCGGTTCATTATTTCAAGTGAACCAGAAACTGCTAAAGAAATACTATGCAGTTCTGCTTTTGGTGATAGACCAGTTAAGGAATCAGCTTATGAGCTTTTGTTTCACAGAGCAATGGGTTTTGCACCGTACGGTGAATATTGGAGGAATCTGAGAAGGATTTCATCGACCCATTTGTTTTGTCCTAGAAGGATTAATGGGTTTGAAGGGTTTAGGAGTGAGGTTGGtttaaaaatggtgaaaagattaaattttttgatgGGTGAAATGGGTAGTGTTGAAGTGAAAAAAGTTCTTCATTTTGGGTCACTTAATAATGTAATGATGACTGTGTTTGGAAaaagttatgatttttttgaaggTGATGGTGTTCATCTTGAGGAGTTGGTGAGTGAAGGGTATGAGTTGTTGAGTATTTTTAACTGGAGTGATCATTTTCCTGTTCTGGGTTGGTTAGATTTGCAGGGTGTTAGAAGAAGGTGTAAAGTTTTGGTTACAAAGGTTAATGCTTTTGTTGGTAAGATCATTGAGGAACATAAAATGAAGAGAACGTTTGAAGGAAAAGCTTTAGTTGGTGATTTTGTTGACGTTTTACTTGATTTGGAGGAAAAAGACAAACTTAGTGATTCTGATATGATTGCTGTTCTTTGGgAAATGATTTTTCGAGGAACAGACACCGTTGCGATATTACTTGAATGGATTTTGGCGAGGATGGTGCTTCATCCAGATATACAAGCTAAAGTACAAGAAGAAATTGATCGCGTTATCGCAGATTCGAAGGTTGTTACTGATGCTGATGTTCAGAACATGCCTTACTTGCAATGCATTGTGAAAGAAGCATTAAGGGTGCATCCACCAGGACCACTTTTATCATGGGCACGTTTATCTGTCCATGATGTTATGGTAGGTAACAAGTTTGTTCCGAAAGGCACAACTGCTATGGTGAACATGTGGGCCATAACTCATGATGAAACAGTTTGGAATGAGCCAGATGAGTTTAAACCAGAAAGGTTTATGAATGAAGATGTTAGTATTATGGGATCTGATTTAAGATTAGCACCTTTTGGAGCTGGTAGAAGAGTTTGTCCTGGAAAAGCTATGGGTTTAGCTTCTGTTCATCTTTGGCTAGCTCAGTTACTTCAAAGCTTCAAATGGGTTCCATCTGATGATGAAGTTGATTTGGAAGAATGTCTTAAGCTTTCAATGGAAATGAAAAAACCACTTGTGTGCAAGGTTGTTCCTAGGACCTAG 1554 0.3771 MSPEFHLLLFPDLVYIQPLTLTFQTALCFFLLVLGFLFWLTPGGLAWALYHKASSSAHAVIPGPSFTGFSGLLSGKTPHRVLAKLAQSHRAKSLMAFSIGLTRFIISSEPETAKEILCSSAFGDRPVKESAYELLFHRAMGFAPYGEYWRNLRRISSTHLFCPRRINGFEGFRSEVGLKMVKRLNFLMGEMGSVEVKKVLHFGSLNNVMMTVFGKSYDFFEGDGVHLEELVSEGYELLSIFNWSDHFPVLGWLDLQGVRRRCKVLVTKVNAFVGKIIEEHKMKRTFEGKALVGDFVDVLLDLEEKDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKVQEEIDRVIADSKVVTDADVQNMPYLQCIVKEALRVHPPGPLLSWARLSVHDVMVGNKFVPKGTTAMVNMWAITHDETVWNEPDEFKPERFMNEDVSIMGSDLRLAPFGAGRRVCPGKAMGLASVHLWLAQLLQSFKWVPSDDEVDLEECLKLSMEMKKPLVCKVVPRT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02075 517 PANTHER CYTOCHROME P450 78A7-RELATED 1 516 - -
Tsu05g02075 517 PANTHER CYTOCHROME P450 78A5 1 516 - -
Tsu05g02075 517 SUPERFAMILY Cytochrome P450 61 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 Pfam Cytochrome P450 75 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Tsu05g02075 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu05g02075 517 Gene3D Cytochrome P450 49 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02075 Tsu-Chr5 24609975 24612017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02075 1 517 Cytochrome P450 AT1G13710 64.176 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02075 K20619 - nnu:104597909 716.842