Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02052 ATGGAAGAAAGACAAGGCCAGTATTATATTTCCAGTCCACCTGAGTCTGAGTTTAACAGGCAAGTGAATCGCAAGGCTGGTATAACAGACCTGAAGCAGAGAGCTCATGGAAGTCGCTCTTGGATAAAAATTGATCAGGATGGAAATTCTGAGATTGTGACACTTGACAAGGCTACTATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTTCGACTATTGGATCCGAAGTTCATTTATCCTTCTTCAATATTAGGAAGGGAGATGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATCACCGCCGACGAAGTCATCCTGATGAATTCACTGGATGGTACTGTTGGTCGGTACAGGTCGCAATTATGCAATCGGCTCCGGAGAGAAAAATCTGATGATCTTCCCTTTGAATTTAGGGCACTGGAGTTAGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAATGAACTAGAGTTGGAAATATATCCGGTGCTCGATGAACTGGCCTCATCTATCAGTACTCTCCTTCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCTTTGACTCAGCGTGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGACGACGATGGTGACATGGCTGAGATGTGTCTGACTGAGAAAAGGAGAAGATCAGATGCTTCCCTTTTAAATGATTGTTTTCAAACTCGTTCTTCAACAGGTAGAGTGATTTCAAAGTCAGCCCCTAATTCACCAGAGCGGTCAGTTAGTGGGCTACAAATGTTGCCAAGGACTTTCAGTGGCATTGCAAATTCAAGTAAATATGGTAGTTCAACGGGTTCATCTGATAATGAAGAAAGGATTCAGCCGTTGGAGATGTTGTTGGAAGCATACTTTATTGTCATTGATAATACTCTCAACACATTATCATCGCTCAAAGAATACATCGACGACACGGAAGATTTTCTCAACATAAAATTGGGAAATATTCAAAATCTCCTAATAAAGTTTGAGATGCTTCTTACAGCAGCCACATTGGTAGCTGCAATATTTGCAGCCGTGACAGGAGTATTTGGAATGAATTTTGAAACCTCTGTTTTTGACTACCCGTCTGGATTCAATTGGGTTTTGGTAATTACTGGAATTGCTTGTGTAGCATTGTATTTTGCCTTACTATTCTATTTTAGATACAAAAAGGTGCTTCCAGAATAA 1218 0.4072 MEERQGQYYISSPPESEFNRQVNRKAGITDLKQRAHGSRSWIKIDQDGNSEIVTLDKATIMRHCSLPSRDLRLLDPKFIYPSSILGREMAIVVNLEQIRCIITADEVILMNSLDGTVGRYRSQLCNRLRREKSDDLPFEFRALELALELTCTSLDAQVNELELEIYPVLDELASSISTLLLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDASLLNDCFQTRSSTGRVISKSAPNSPERSVSGLQMLPRTFSGIANSSKYGSSTGSSDNEERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDDTEDFLNIKLGNIQNLLIKFEMLLTAATLVAAIFAAVTGVFGMNFETSVFDYPSGFNWVLVITGIACVALYFALLFYFRYKKVLPE 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02052 405 CDD Mrs2_Mfm1p-like 41 402 IPR039204 -
Tsu05g02052 405 Gene3D Magnesium transport protein CorA, transmembrane region 343 403 - -
Tsu05g02052 405 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 341 393 IPR045863 -
Tsu05g02052 405 Coils Coil 191 211 - -
Tsu05g02052 405 Gene3D - 27 112 - -
Tsu05g02052 405 PANTHER MAGNESIUM TRANSPORTER MRS2-5 16 404 - -
Tsu05g02052 405 Gene3D Magnesium transport protein CorA, transmembrane region 116 336 - -
Tsu05g02052 405 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 16 404 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02052 Tsu-Chr5 24267766 24270262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02052 18 404 MRS2 Gene Family AT2G03620 64.304 2.82e-167 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02052 K16075 - gmx:100803935 638.647