Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02047 ATGGAATCAGTTTCACCAATTATCTCTTCCTCCTCCAATAAAACCTTATTATTAACATTAGAAGAATGGAACGGTTCATCTCCCACTAAGCTCTCCAAGACTTTCACCATCAAagcttcttcttcctctttctcCATTCAAAGGTTCTTATTCTTTCTCCTTCTCCCTTCTTCATCATATTCTCTCCTTATATTCTTCAATTTACACAGATCTGGTGCTCGTTTCACCCATGTTTGGAGACGTTTTCTTCAAGCATTTGTTCCTGAGggttttcctaGCAGTGTTACTCCAGATTATGTTCCTTTTCAAATTTGGGATTTATTGCAGGGTCTTTCAACATATATAAGGACTATGCTTTCTACCCagGCTCTCTTGAGTGCTATTGGAGTTGGTGAGAAATCAGCTACAGTCATTGGTGCCACATTTCAGTGGTTTTTGAGAGATCTAACCGGCATGCTTGGAGGAATCTTATTCACATTCTACCAGGGATCAAATCTTGATAGCAATGCAAAAATGTGGCGTTTGGTGGCAGATCTCATGAATGATCTTGGTATGCTAATGGACCTCATTTCACCATTGTTTCCAtcagcttttgtttttattgtttgctTGGGAAGCATATCAAGATCTTTCACTGGGGTTGCAAGTGGAGCTACTAGAGCAGCTTTGACTCAGCATTTTGCTCTTCAGGATAATGCGGCAGATATATCTGCTAAGGAAGGAAGTCAAGAAACTGTGGCGACAATGATTGGCATGGCACTAGGAATGCTTGTTGCTCGCATTACTATTGGACACCCACTAGCAatatggttttcttttttgtctctGACCCTGTTTCATATGTATGCAAACTACCGAGCTGTTCGATGCTTGGCATTGAACTCATTAAACCCTGAAAGAAGCTCTATTCTTTTGCAACATTTCACGGAGACTGGTCAAGGtattgtttgtttcaacttttcATTACTATCTTATCCTCAACTAATCTTTGATGCTAGACTTAGACCATCTATTCTCCTTTTTATGATCTTGGCACATAAATCGGCTACATCTTAG 1056 0.3674 MESVSPIISSSSNKTLLLTLEEWNGSSPTKLSKTFTIKASSSSFSIQRFLFFLLLPSSSYSLLIFFNLHRSGARFTHVWRRFLQAFVPEGFPSSVTPDYVPFQIWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLFPSAFVFIVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARITIGHPLAIWFSFLSLTLFHMYANYRAVRCLALNSLNPERSSILLQHFTETGQGIVCFNFSLLSYPQLIFDARLRPSILLFMILAHKSATS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02047 351 PANTHER RUS1 FAMILY PROTEIN C16ORF58 11 315 IPR006968 -
Tsu05g02047 351 Pfam Vitamin B6 photo-protection and homoeostasis 76 312 IPR006968 -
Tsu05g02047 351 PANTHER PROTEIN ROOT UVB SENSITIVE 3 11 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02047 Tsu-Chr5 24187567 24191715 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02047 - - mtr:MTR_5g044720 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02047 05 24187567 24191715 Tsu05g02047 05 24187567 24191715 ECH