Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02039 ATGTCTTCTGTAACAAACCCAGTTCTCATATCAGTTCAAAGACCTCAAATTTCTTCACTTTTTTTGTTATCTAAAAGAGTTTCAACTTCAACTAGTTATGGATTGTTGAAGTCTCGAACAGTACTTCAACATGAGGCTAAAAATTCAAGCTTAGCTTTCTCTCCATTGGTGAAAGGGTTGAGATTAAGAGAAAGAAGGCTTCCAGTTGTTGCAGCCTTAGCAGCAGATGCTGATGATAGTGAAATTGGAATCACAAATCGGTCTGTCGAATCCTCAAAGAGTTTTGGAGAGAAATTTCCTGCATTGCTTActggtttctttttctttatgtGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTAGGGGTGGTATATTGCCTTATTAGCTGGGGTGTAGGTCTACCAAAACGTGCACCAATGAATAAGGAGCTTTTGCTTCTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCTAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACACATACTATAAAAGCTTTGGAGCCATTTTTCAATGCTTCAGCTTCTCAGTTTGTGTTAGGCCAGCATATTCCTCTGTCTCTGTGGCTATCTTTGACTCCTGTTGTTCTAGGTGTATCAATGGCATCACTAACTGAACTATCTTTCAATTGGACTGGTTTCATTAGTGCTATGATTTCAAATATAGCATTTACTTACAGAAGTTTATATTCTAAGAAAGCAATGACTGGAATGGACAGTACAAATGTATATGCGTATATTTCAGTGATTGCGCTTGCCTTTTGCATCCCGCCAGCAATACTTATTGAGGGACCCCAACTCATGGAATTTGGATTTAAAAATGCTATTGCCAAAGTAGGACTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTACCATCTTTATAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCACCACTAACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTTGTCATTGGATTCTCTATAGTGGTTTTtgGCAACAAGATATCCACACAAACTGGCATTGGCACTGCTATTGCAATTGCAGGTGTTGCCATCTATTCTCTGATAAAAGCAAACATGGAAGAGCAAAAACGGAAAGCTGCTGCAGCCCTTGCATCTTAA 1230 0.3732 MSSVTNPVLISVQRPQISSLFLLSKRVSTSTSYGLLKSRTVLQHEAKNSSLAFSPLVKGLRLRERRLPVVAALAADADDSEIGITNRSVESSKSFGEKFPALLTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLISWGVGLPKRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQHIPLSLWLSLTPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFKNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANMEEQKRKAAAALAS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02039 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
Tsu05g02039 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 102 400 IPR004696 GO:0016021|GO:0022857|GO:0055085
Tsu05g02039 409 Pfam Triose-phosphate Transporter family 104 390 IPR004853 -
Tsu05g02039 409 PANTHER TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC-LIKE ISOFORM X1 51 398 - -
Tsu05g02039 409 PANTHER SOLUTE CARRIER FAMILY 35 51 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02039 Tsu-Chr5 23975356 23979090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02039 54 401 Antiporters AT5G46110 75.783 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02039 K15283 - pvy:116132902 592.038