Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02035 ATGTTGTCTTATGCTGTGTTACATATTGTCATATTTGAGATGGAAAACTTCAGAGATACCTACAGAGATGTTGATGTGTCTTCAACTGAAAGTGAGTCATCTGATGCGTCTGATGCTGAATATGAATCTAGTGATGATGTTGCATCGTCTTCACATCAAAGTTCAAATGATGATTATGTTGCTGATAATGACATTAACGATGATGAGGATACGGTCCAAGAGGAGGGGTCAAATAACCATGCAATTGTAGGTGGTAGTCTGGTGAGTGTTAAGTCCGTTAACGCTGATCAAATTCGTGCTATGGAATTTGGAAGTGTGCCTGAAACATATGATTTTTATTATCGGTATGGTAAATGTCATGGTTTTAGAGTGAGGAAAAGCGATATTAGGAAAAAATTGACCGAAGATGGTGAAGTGCTAATATTAATGAGGCAGTTTGTGTGCAGTAATGAAGGGTTAAGAAGCTTCAAGCACTTATCTAGGAAAAACAGGTTAAGAGATCACCGTCGTCTGACCCGCACTGATTGTATGGCTAGGATCCGACTTATCTACAAACCTAAACAAGGCACCTATGCAGTGTCGGTGTTTCACGAGACTGATAACCATGAACTAACTCCATCGAGGTATGTGCATTTACACCCGGTTTATCGTAAAATCTCTGAATCGGATAAAGCTCAAATTGACGGTCTTCAGTCTAATGGGATCAGAACTTGTCATATCATGGGATACATGATTGCTCAAAAGGGTGGATACCCAAGGGTTGGTTTTACACAGAAAGAtttgtataattattttgataaaaaaatgcgtGCTTGTGTTAAAGATGGTGATGTCTCTGCGGGTTTAAATTATCTGAATGTCAAATCATCTACCGATCCGATGCTATATGCAGAATATTCTGTGGATAGTGATGGGCGTATGAAAACACTTTTTTGGGCAGACGACATTAGTAGATCTGATTATTTCTGTTTTGGTGATGTTCTTGCGTTTGACACGACatacaagaaaaacaaatataattatcCACTTGTTGTTTTTTCTGGATGCAACCACCACTTACAAACTGTCATATTTGGTGTTGCATTGGTGGCGGATGAAATGACTGAGACGTATAAGTGGTTGCTGAAGACCTTTTTAGCCTGCATGGAAAACAAATCTCCACAAGGAGTTATCACAGACGGAGATGGGGCCATGAGAGAGGCTGTAAAGCAGATTTTTCCTGATGCAACCCATAGGTTGTGTGCTTGGCATTTGAACAAGAATGCAGGTGAAAATATAAAGAATAACAAATTTTTGAGTGATTTTAGCAGAGCAATGTACTCAAATTTTACACCTGAGGAATTTGAAGATTTTTGGGCAAAGTTAGTGAAGGAGCATAAACTAGGATCAAATGCTTGGGTTGCAAAAACATACGAGAACAAAAAACGTTGGGCATCTGCATATCTACGCAATCGGTTCTTTGGTCATATAAGAACTACATATCAATGTGAAGCGATCAATGCAATAATCATGACTTATGTAAGGAGGAAAAGGTGCATATATGAATTTATGCATAATTTTGAACAGGCATTGAGAGGGTATAGAAATAATGAACTTGTTGCTGATTTTAAATCAAAGTTTTCACAACCTGTGTTGACAAGTCATTTGATATTGATTGAGACAGATGCTGCTAAAAAGTATACGGCAGAGGTTTTTTTGGAGGTAAGAGAACAAATTTTGAAGATTGTTGCATTAATGGTGAGGTCAAAAGTTGTAACGGGGGATGTGTCGACTTATACCTTGACAAAATATTGTGCGACTGAAGTTATAAGAAAAATTGTATATGATGTTTCAAGTAAATCATTCCAGTGTTCGTGTAGAATGTTTGAGTCTCGCGGACTTCCATGTTCTCACATCTTTTATGTCATCAAGGAAGAGCATATTGATCACATTCTGGATCGTTTGGTTTTGTCACGTTGGACAAAGGATGCCAAAGTTGGGTTGTTCAACATGGCTTATGATGAGGATGAGGACATGCATAAAAGATATATCGAGCAAACTCGTTTTGGTGCTTTTTGTTCTAGTTTTACAGTTTTTTGCAGGGAAGTTTCAAAAAAGGAAGGTGTTTACGGGGACGCAATGGATGACATTATGAAACTACATCAAAAGTATTGTCCTCCTGTGTAG 2166 0.3753 MLSYAVLHIVIFEMENFRDTYRDVDVSSTESESSDASDAEYESSDDVASSSHQSSNDDYVADNDINDDEDTVQEEGSNNHAIVGGSLVSVKSVNADQIRAMEFGSVPETYDFYYRYGKCHGFRVRKSDIRKKLTEDGEVLILMRQFVCSNEGLRSFKHLSRKNRLRDHRRLTRTDCMARIRLIYKPKQGTYAVSVFHETDNHELTPSRYVHLHPVYRKISESDKAQIDGLQSNGIRTCHIMGYMIAQKGGYPRVGFTQKDLYNYFDKKMRACVKDGDVSAGLNYLNVKSSTDPMLYAEYSVDSDGRMKTLFWADDISRSDYFCFGDVLAFDTTYKKNKYNYPLVVFSGCNHHLQTVIFGVALVADEMTETYKWLLKTFLACMENKSPQGVITDGDGAMREAVKQIFPDATHRLCAWHLNKNAGENIKNNKFLSDFSRAMYSNFTPEEFEDFWAKLVKEHKLGSNAWVAKTYENKKRWASAYLRNRFFGHIRTTYQCEAINAIIMTYVRRKRCIYEFMHNFEQALRGYRNNELVADFKSKFSQPVLTSHLILIETDAAKKYTAEVFLEVREQILKIVALMVRSKVVTGDVSTYTLTKYCATEVIRKIVYDVSSKSFQCSCRMFESRGLPCSHIFYVIKEEHIDHILDRLVLSRWTKDAKVGLFNMAYDEDEDMHKRYIEQTRFGAFCSSFTVFCREVSKKEGVYGDAMDDIMKLHQKYCPPV 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02035 721 Pfam FAR1 DNA-binding domain 111 205 IPR004330 -
Tsu05g02035 721 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 97 682 IPR031052 GO:0006355
Tsu05g02035 721 SMART 26again6 615 642 IPR006564 GO:0008270
Tsu05g02035 721 MobiDBLite consensus disorder prediction 28 78 - -
Tsu05g02035 721 ProSiteProfiles Zinc finger SWIM-type profile. 608 640 IPR007527 GO:0008270
Tsu05g02035 721 MobiDBLite consensus disorder prediction 43 60 - -
Tsu05g02035 721 PANTHER OS02G0262500 PROTEIN 97 682 - -
Tsu05g02035 721 Pfam MULE transposase domain 327 421 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02035 Tsu-Chr5 23897165 23899330 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g02035 FAR1 1.6e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02035 - - ccaj:109792835 788.489