Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g02033 ATGGCTCTTCTTGGTTATTTTCTGCTTTTCCTTTCCCTCACTGGATATTCATGTGGTGCTCTTTATTGTGTGTGTAAAGATGGTGTTGGAGatcaaaatcttcaaaaagcAATAGATTATGCTTGTGGTGCTGGAGCTGATTGTacacaaattcaacaaaatggACCATGTTTTCAACCCAATACTATTAAGGATCATTGCAATTATGCTGTTAATAGCTATTTCCAGAAAAAGGGTCAAGCTCAAGGAAGTTGTGACTTTTCTGGTTCTGCTGTTACAAGTCCAACTCCACCTTCTACTGCATCATCTACATGTTCATTTCCCTCAAGTGGTAGTGCAGGAGGAGGTACAACCACACCACCTTCAACCAATACACCTACAGGCATATCACCACCTTCCACCATAACTCCAACCACTCCTACAGGCACAACACCAGGTACAGGGACAGGAACAGGTACAGGTACAACTACAGGCACACCAACAAGCACAGGAACAGGAACAGGTGTAGGCACTGGAACAGGTACAGGCACTGGCACCGGTACAACCACAGGTGGTCCTAATGTGTTTGGAATAAGTCCAACATCATCAACTGGTAATGGTAGTGGTTTCAGTGACCCTAATGAAGCTGTTCAATTAAACAAAAGCACTTATGTGTTATTACTATCTCTTGTTTTTACTTTATGGCTAGCAATTTTAAGGGACTACTAG 708 0.4068 MALLGYFLLFLSLTGYSCGALYCVCKDGVGDQNLQKAIDYACGAGADCTQIQQNGPCFQPNTIKDHCNYAVNSYFQKKGQAQGSCDFSGSAVTSPTPPSTASSTCSFPSSGSAGGGTTTPPSTNTPTGISPPSTITPTTPTGTTPGTGTGTGTGTTTGTPTSTGTGTGVGTGTGTGTGTGTTTGGPNVFGISPTSSTGNGSGFSDPNEAVQLNKSTYVLLLSLVFTLWLAILRDY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g02033 235 Pfam X8 domain 22 91 IPR012946 -
Tsu05g02033 235 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 4 1 220 - -
Tsu05g02033 235 PANTHER BETA-1,3 GLUCANASE 1 220 IPR044788 -
Tsu05g02033 235 MobiDBLite consensus disorder prediction 86 202 - -
Tsu05g02033 235 Gene3D - 16 112 - -
Tsu05g02033 235 SMART X8_cls 21 107 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g02033 Tsu-Chr5 23825796 23829086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g02033 12 108 Glycoside Hydrolase AT2G05790 44.898 3.94e-20 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g02033 - - mtr:MTR_5g044530 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g02033 05 23825796 23829086 Tsu05g02033 05 23825796 23829086 ECH
Tsu02g03151 02 35147534 35150447 Tsu05g02033 05 23825796 23829086 PCT