Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01840 atggatATCTCAGAGATCGCAAAGAAACTCGGTTTCTCCGATTCCAAACTTCTCATCCGTAAAGCCGCCGAACTCCGTCGCCTATGCGATGTTCATTTCGATTCCTCCATCATCGGCGTCGGCGAGGTTGCGAAAGCTATCATCTGTATGGAAATTGCTGCAACAAGGCTCGGTGTTCTCTTCGATCGATCCGCTGCGGTGAAACTAAGTGGAATGTCTGAAAGAGCTTATATTAGATCCTATAATTCACTTCACAATGGCATCGGCGTCAAGTTGAAGCTAGACGTGAGGGAATTGGCGATTCAATTCGGTTGTGTTCGGATCATACCTTATGTTCGTGACGGTCTTAAGCTTTATAAGGATCGGTTTCTTTCGTCGTTGCCGGCTGCTCGCCGTGCTAGTGCTGATTTTACTCGTCCGGTGTTTATGGCCGTTGCTTTTTATTTATGTGCAAAGAAACACAAGCTCAAAGTTGATAAGATTAAGCTAATTGAACTCTGTGGTACATCTGAAGCTGAATTTTCCAGTGTTTCTACTACTATGAAAGATTTGTGCCATGATGTTTTTGGGGTAgctaaagaaaagaaagatccTAAAGAAGTTAAGACCAATAGAGACCTGCTTGATGTCTTGCCAAGCAAAAGAAAAGCTGAGGACGGTGGCTATTTGTCTGATGATGGAGCAGAGGTTTCAAGttataaaaaaaggaaacagACGGAAACACGTGATTATGAGAAGTGGAAATCTTCAGTCCTTACATCCAACAAACAAGATAAGAAAGAAGTGCCTAGCAAGAAACCAATACAGACTCGCCTCAACTTTGTTAAGGAAGCTCCTGAAATCCAGAAGTTGGAGGCAATGTAA 864 0.4132 MDISEIAKKLGFSDSKLLIRKAAELRRLCDVHFDSSIIGVGEVAKAIICMEIAATRLGVLFDRSAAVKLSGMSERAYIRSYNSLHNGIGVKLKLDVRELAIQFGCVRIIPYVRDGLKLYKDRFLSSLPAARRASADFTRPVFMAVAFYLCAKKHKLKVDKIKLIELCGTSEAEFSSVSTTMKDLCHDVFGVAKEKKDPKEVKTNRDLLDVLPSKRKAEDGGYLSDDGAEVSSYKKRKQTETRDYEKWKSSVLTSNKQDKKEVPSKKPIQTRLNFVKEAPEIQKLEAM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01840 287 CDD Orc6_mid 93 188 - -
Tsu05g01840 287 MobiDBLite consensus disorder prediction 217 270 - -
Tsu05g01840 287 Gene3D - 92 188 - -
Tsu05g01840 287 MobiDBLite consensus disorder prediction 217 266 - -
Tsu05g01840 287 PANTHER BNAC05G50940D PROTEIN 1 278 - -
Tsu05g01840 287 Pfam Origin recognition complex subunit 6 (ORC6) 4 91 IPR008721 GO:0003677|GO:0005664|GO:0006260
Tsu05g01840 287 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 6 1 278 IPR020529 GO:0005664|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01840 1 282 Core DNA Replication Machinery Family AT1G26840 66.197 1.09e-133 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01840 K02608 - gmx:100777539 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01840 05 20028861 20031501 Tsu05g01840 05 20028861 20031501 ECH