Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01820 atgaacGTGGATCTGGAATCCTTGGCAGAAGCCACTTCTGGAGCCATAGGATCATTGCTTAGCACAACAATTCTTTACCCACTTGATACCTGTAAAACAAAGTATCAAGCTGAGGCACGTTCTCATGGTAACAGAAAGTACAAGAATCTCTCTGATGTGTTATGGGAGGCAATATCTAACCGTCAGATTCTTTCGCTTTACCAGGGCCTCGGAACAAAAAATCTCCAATCCTTCTTTTCACAGTTTGTCTACTTCTATGGTTATAGTTACTTTAAAAGACTGTATCTCGAAAAAAGTGGATATAAATCCATTGGAACAAGAGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCTGTCACAGCCATTACAACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACAAGTGCCTTTGGAAAATCTAAAGGGCTACTGAAAACCCTTACAGAAGGCTCGTGGAGTGATGCATTTGATGGCCTTAGCATTTCTTTGATGCTCACCACAAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTGAAAAACCGAGTACTGACAAATAACCAAAACATATCCGAGAAAGGAGTATCTCCAACATCACTGTCTGCATTTATGGCCTTCCTTTTAGGTGCAATTTCGAAGAGTATTGCTACCTGTCTAACATATCCTGCTATCAGGTGCAAAGTAATCATTCAAGCTGCAGATGCGGATGAAGAATCTtccaaaaaattgataaaatcgCCAAAAACCGTGTCCAGCGTTCTCTATGGAATATGGAAAAAGGAGGGAATTTTGGGCTATTTTAAAGGATTACATGCTCAGATATTGAAAACTGTTTTGAGCTCGGCATTGCTCTTGATGATCAAGGAGAAGATCTCTGCTACTACTTGGGTCCTTATACTTGCAATTAAAAGGTATCTCTTACTCCCAAAGGGTAGGGTTAAGAACTTGTAA 957 0.4023 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARSHGNRKYKNLSDVLWEAISNRQILSLYQGLGTKNLQSFFSQFVYFYGYSYFKRLYLEKSGYKSIGTRANLLIAAAAGAVTAITTQPLDTASSRMQTSAFGKSKGLLKTLTEGSWSDAFDGLSISLMLTTNPAIQYTVFDQLKNRVLTNNQNISEKGVSPTSLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADADEESSKKLIKSPKTVSSVLYGIWKKEGILGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIKRYLLLPKGRVKNL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01820 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Tsu05g01820 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Tsu05g01820 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Tsu05g01820 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Tsu05g01820 318 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Tsu05g01820 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Tsu05g01820 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Tsu05g01820 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 1 317 - -
Tsu05g01820 318 Gene3D Mitochondrial carrier domain 6 297 IPR023395 -
Tsu05g01820 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01820 Tsu-Chr5 19733868 19737811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01820 23 312 Chloroplast and Mitochondria Gene Families AT1G25380 26.144 2.73e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01820 - - gmx:100787682 534.643