Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01801 atGCAGACAAATTATGGAGATATTGAATTTGGTTTCTATCCAACTGTTGCACCCAAAACTGTTGATCACATTTTTAAGCTTGTGAGACTTGGAGGCTATAACACCAATCATTTCTTTCGGGTGGATAAGGGATTTGTAGCCCAAGTAGCTGATGTTGCTAATGGAAGATCTGCTCCCATGAATGAGGAACAAAGAAGAGAAGCTGAAAAGACCGTTGTTGGTGAATTTAGTGATGTCAAACATGTTCGGGGAATTCTTTCTATGGGAAGGTATGACGATCCAGATAGTGGTTCATCCTCTTTTTCAATGTTACTCGGAAATTCTCCTCATCTTGATGGGAAGTATGCAATATTTGGAAAAGTTACTAAAGGTGACGATACATTGGCAAAGCTTGAGCAACTACCTACCCGTAAAGAGGGAATATTTGTCATGCCAACGGAGCGCATCACCATCCTCTCATCATATTACTATGACACGGAGACAGAAAATTGCGAGCAAGATAGATCGATTTTGAAGCGCAGGTTAGCTGCATCAGCCATTGAAGTTGAAAGACAGAGAATGAAATGCTTCCCCTGA 576 0.4097 MQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVANGRSAPMNEEQRREAEKTVVGEFSDVKHVRGILSMGRYDDPDSGSSSFSMLLGNSPHLDGKYAIFGKVTKGDDTLAKLEQLPTRKEGIFVMPTERITILSSYYYDTETENCEQDRSILKRRLAASAIEVERQRMKCFP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01801 191 Gene3D - 1 164 IPR029000 -
Tsu05g01801 191 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 156 IPR002130 GO:0000413|GO:0003755
Tsu05g01801 191 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 1 191 IPR044233 -
Tsu05g01801 191 SUPERFAMILY Cyclophilin-like 1 158 IPR029000 -
Tsu05g01801 191 CDD cyclophilin 1 153 - -
Tsu05g01801 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 IPR002130 GO:0000413|GO:0003755
Tsu05g01801 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Tsu05g01801 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 50 IPR002130 GO:0000413|GO:0003755
Tsu05g01801 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 12 27 IPR002130 GO:0000413|GO:0003755
Tsu05g01801 191 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 153 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01801 1 157 U-box Gene Family AT5G67530 25.625 1.01e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01801 - - gmx:100819238 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01801 05 19310400 19317604 Tsu05g01801 05 19310400 19317604 ECH