Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01778 ATGAAAGTAGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCACAATGCAAAATCACAAGTCATATACCGCGATTTCAAAGCTTCTAACATCCTTTTGGATGCGGAGTTTAATTCTAAATTATCTGATTTTGGCTTGGCTAAGGCGGGTCCTACCGGTGATAGAACTCACGTGTCTACTCAAGTTATGGGTACTCAAGGATATGCCGCACCTGAATATGTTGCAACTGGTCGGCTGACGGCCAAGAGTGATGTATACAGCTTTGGAGTTGTTATGCTTGAACTTTTATCCGGAAGACGTGCTGTCGATAAAACAATAGCTGGTGTTGACCAGAATCTAGTAGACTGGGCAAAACCATATTTAGGTGATAAACGGAGACTATTCCGGATCATGGATTCCAAATTAGAAGGCCAATATCCACAAAAAGGAGCATTCATGGCTGCCACACTTGCACTACAATGCCTTAACAGAGAAGCAAAGGCAAGGCCTGCAATGATAGATGTTTTAGCAACTCTTGAACAGATAGAAACACCTAAACAGGCACCTCGGATTTCCTTATCAGAACATCAGAGACTCCATGCTCCTGTGAGAAGGTCTCCTGCTCGAAACCGGACACCTTCAAATGTTACTCCTACTGCATCGCCACTGCCATCTGTTCGGCAATCTCCTCGTGCGCGCTAG 681 0.4464 MKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGVVMLELLSGRRAVDKTIAGVDQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNREAKARPAMIDVLATLEQIETPKQAPRISLSEHQRLHAPVRRSPARNRTPSNVTPTASPLPSVRQSPRAR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01778 226 MobiDBLite consensus disorder prediction 180 226 - -
Tsu05g01778 226 MobiDBLite consensus disorder prediction 201 226 - -
Tsu05g01778 226 PANTHER OS01G0588500 PROTEIN-RELATED 1 224 - -
Tsu05g01778 226 Pfam Protein kinase domain 7 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01778 226 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Tsu05g01778 226 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01778 226 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 1 224 - -
Tsu05g01778 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Tsu05g01778 226 SUPERFAMILY Protein kinase-like (PK-like) 2 193 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01778 Tsu-Chr5 18580140 18583874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01778 1 187 Glycoside Hydrolase AT3G07070 54.787 5.78e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g01778 Pkinase 4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01778 - - gmx:100809778 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01778 05 18580140 18583874 Tsu05g01778 05 18580140 18583874 ECH