Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01777 ATGGACTcacaattcttttattcttcGTTGGCATCAGAGATCTCTGAGGGTGAAATCTTGTCTTCTCCTAGTCTTAAAGCCTTTGCATTCACTGAGCTAAAGAATGCCACGAGGAATTTTCGTCGCGATAGTCTTCTTGGTGAAGGCGGATTTGGTCATGTTTATAAGGGATGGATAGATGAACACACCTATACGGCTGCAAAACCTGGATCAGGAATGGTTATTGCTATTAAAAGACTTAAGCCTGAAAGTTTTCAAGGTCATAAGGAGTGGTTGACCGAAGTTAACTACCTTGGACAACTGCACCATcctaatttggtaaaattaattgGGTACTGCTTAGAAGGAGAAAACCGGCTATTGGTATATGAGTTTATGCCTAAAGGGAGCTTAGAGAACCATTTATTTAGAAGAGGACCAGTACTGTCTAGTCTTTCTTGGTCAATAAGGATAAAAGTAGTTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCACAATGCAAAATCACAAGTCATATACCGCAATTTCAAAGGTTCTAACATCCTTTTGGACGCGGAGTTTAATTCTAAACTATCTGATTTTGGCTTGGCTAAGGCGGGTCCTACCGGCGATAGAACTCATGTGTCTACTCGAGTTATAGGTACTCATGGATATGCCGCACCTGAATATGTTGCAACTGGTATACTTTAG 690 0.3913 MDSQFFYSSLASEISEGEILSSPSLKAFAFTELKNATRNFRRDSLLGEGGFGHVYKGWIDEHTYTAAKPGSGMVIAIKRLKPESFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPVLSSLSWSIRIKVVIGAARGLSFLHNAKSQVIYRNFKGSNILLDAEFNSKLSDFGLAKAGPTGDRTHVSTRVIGTHGYAAPEYVATGIL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01777 229 ProSitePatterns Protein kinases ATP-binding region signature. 46 78 IPR017441 GO:0005524
Tsu05g01777 229 PANTHER OS01G0588500 PROTEIN-RELATED 15 229 - -
Tsu05g01777 229 Pfam Protein tyrosine and serine/threonine kinase 43 226 IPR001245 GO:0004672|GO:0006468
Tsu05g01777 229 ProSiteProfiles Protein kinase domain profile. 40 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01777 229 SUPERFAMILY Protein kinase-like (PK-like) 14 227 IPR011009 -
Tsu05g01777 229 Gene3D Transferase(Phosphotransferase) domain 1 126 229 - -
Tsu05g01777 229 Gene3D Phosphorylase Kinase; domain 1 15 125 - -
Tsu05g01777 229 PANTHER BNAA06G34000D PROTEIN 15 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01777 Tsu-Chr5 18573893 18577324 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01777 16 229 Glycoside Hydrolase AT3G07070 52.093 2.49e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g01777 PK_Tyr_Ser-Thr 7.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01777 - - zju:107428831 394.43