Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01774 ATGGTTGTTGCTGTTAAAAGACTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTATTGTTAACTACCTTGGACAACTGCACCATcctaatttggtaaaattaattgCGTACTACTTAGAAGGAGAAAACCGGCTATTGGTATATGAGTTTATGCCTAAAGGGAGCTTAGGAAACCATTTATCCAGAAGAGCACCACAACCACTGTCTTGGTCAATAAGGATGAAAGTAGCTATTGGTGCTGCTAGAGGACTCTCTTTTCTTCACAATGCAAAATCACAAGTCATATACCGAGATTTCAAAGCTTCAAACATCCTTTTGGACGCGGAGTTTAATTCTAAACTACGTGTATCTGATTTTAGCTTGGCTAAGGCGGGTCCTACCGGTGATAGAACTCACGTGTCTACCCAAGTCATCGTGGGTACTCAAGGATATGCCGCACCTGAATATGTTGAAACTGGTATACTTTAG 477 0.3983 MVVAVKRLKPEGFQGHKEWLTIVNYLGQLHHPNLVKLIAYYLEGENRLLVYEFMPKGSLGNHLSRRAPQPLSWSIRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLRVSDFSLAKAGPTGDRTHVSTQVIVGTQGYAAPEYVETGIL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01774 158 Gene3D Transferase(Phosphotransferase) domain 1 55 158 - -
Tsu05g01774 158 PANTHER BNAA06G34000D PROTEIN 1 158 - -
Tsu05g01774 158 PANTHER OS01G0588500 PROTEIN-RELATED 1 158 - -
Tsu05g01774 158 SUPERFAMILY Protein kinase-like (PK-like) 2 156 IPR011009 -
Tsu05g01774 158 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Tsu05g01774 158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Tsu05g01774 158 Pfam Protein kinase domain 2 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01774 158 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01774 Tsu-Chr5 18521591 18522771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01774 1 158 Glycoside Hydrolase AT3G07070 55.901 9.05e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu05g01774 Pkinase 1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01774 - - gmx:100809778 278.485