Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01765 ATGGAAAACTTCCAAAACTACAGAGATGTTGATGTTCATTCATCTGCAACCGATTCATCTGATGcatcttcagaatctgatgaatATTACGGTAGTGAAAATATTGAGGATGAAGATGCGGGCGTGTCAACGGACCAAGCAACTGCAAGTGATAAATTCTTAAGCATTGATTCCATGACTGCTGAGGAAATTAGTGCCATGGAATTTGTAAGTGAGGCTCAGGCTTATGATTTTTATTACCAATATGCAAGACATAAAGGTTTTGCCATTCGTAGAAGCTCTACTAAGCGTAAAGGGCCCACCGGTAATCGAATCATAGTAATGAGGGAGTTCGTATGCAACAGGGAAGGCTTAAGAAACAAGAAGCACTTGACTAGGGTGGATAGGCGTAGAGAACACCGTCGGGTTAGTCTTACTAAATGCACAGCTAGGCTACCTAAGTTTGTCCATTTACACCCTGTTTATCGTAACATTTCTGAATCAGATAAAGCTCAAATTAATGGTCTTCATACACATGGGATCAGAACTTGTCATATAATGGGATACATGGTTGCTCAAAAGGGAGGATATACTGATGTTGGTTTtacaaaaaaagatttgtacaattATTTCGATAAAAAGATGTGTGCTATTGTTAAAGATGGTGATGTTTCTGCTGCTTTAAATTATCTGAATGTGAAATCATCTACTGATCCCATGCTATATGCAGAGTATTCTGTCAATGGCGAAGGGCGTTTGAAAACACTTTTTTGGGCAGACGGAATAAGTAGATCTGATTATTTCTGTTTTGGTGATATTGTTGCGTTTGACACAACatacaagaaaaacaaatacaattatCCACTGGTTATTTTTTCTGGGTGCAGCAACCACTTACAAACTGTCATATTTGGCGCTGCATTGGTGTCAGATGAAACGATTGAGACGTATAAGTGGTTGCTCGAGACCTTTTTAGAGTGCATGCAAAATAAATATCCAAAGGGAGTTGTCACAGACGGGGATGGGGCCATGAAGGAGGCTATAAAGCAGATATTTCCTGATGCAAACCATAGGTTGTATGCTTGGCACTTGAACAAGAATGCAGGTGATAATATAAAGAATGCtgattttttaaatggatttagAAAAGCAATGTTCACAAACTTTACACCTGaggaatttgaagaattttggtCAAATCTACTGAAGGATACTGGACTTGAATCAAATGCTTGGGTTGCCAAAACATATGAGAACAAGTTACTTTGGGCTACTGCATATCTACGTGAAAAGTTCTTTAGTCGTATAAGAACTACGTCTCAATGTGAAGCAATCAATGCAATAATCAAGAATTATGTAAGGAAGAAAGGGTGCATTTATGAATTTATGCATAATTTTGAACAGGCATTGCTAGGGTACAGAAACAGTGAACTAGTTGCTGATTTTAAATCCAAGTTTACAGATCCTGTGTTGTCAAGTCATCTGGATTTGATTGAGGCCGATGCTGCTAGAATTTACACGGCAGAGGTTTTTATGGAAGTAAAAGAACAAATATCGAAGGTTGTTGCATTAATTCGGAAGGAACGGTTTACAATGGGGGATACGAAGATTTATATGTTGACAAAATATTGTGATTCTGATTATGCAAGACAAACTGCATATGATGTTTCGAGTCAAAAACTTCGGTGTTCCTGTAGATTGTGCGAGTCTCGCGGGCTTCCATGTTCTCACATCTTTTATGTGATGAAGGAAGAAAGTATTGATCACATTCCTGCTAGTTTGGTTTTGAGCCGTTGGACCAAGGATGCCAAAGCTGGGTTCTTGAACATGAACTCTAATGAGGACGTAGATTCCAAAATGATGGAGCAAGCGCGGTTTAGTGCTTATTGTTTTGCTTTTACTGCTTTTTGCCAAAAATCTTCCAAAAAGAAGGGTGTTTATGGGGATATAATGCATGACATAATGAAACTCCATCAAAAGTATTGTGATGATGAGGACCCCGAAAACGAAAAGGTAGGTGATCCAAAGACTGTGAATGGCAAAGGAGCTCCTAAGAGAAAAAAGACGCGCGTGAAAAGCATCAGACACTGTAAATACTGCCAAAGTATCCATCATGATGCGAGGAATTGTCCAGAAAAGCCGGAATGGGCAGATGAAGATGTTGCGGTTGACTCGGTTTCGATAAATGATTCTTCCAGCCATAAACAAAAGGAACAACAGTGGAAGGGGCTAAGGAATATTGGAGTGGGGCGCAAGTTGAAGGATGCAAAGTTGTTTTCTTTAGTGGTAAGCTTTACTTAG 2280 0.3785 MENFQNYRDVDVHSSATDSSDASSESDEYYGSENIEDEDAGVSTDQATASDKFLSIDSMTAEEISAMEFVSEAQAYDFYYQYARHKGFAIRRSSTKRKGPTGNRIIVMREFVCNREGLRNKKHLTRVDRRREHRRVSLTKCTARLPKFVHLHPVYRNISESDKAQINGLHTHGIRTCHIMGYMVAQKGGYTDVGFTKKDLYNYFDKKMCAIVKDGDVSAALNYLNVKSSTDPMLYAEYSVNGEGRLKTLFWADGISRSDYFCFGDIVAFDTTYKKNKYNYPLVIFSGCSNHLQTVIFGAALVSDETIETYKWLLETFLECMQNKYPKGVVTDGDGAMKEAIKQIFPDANHRLYAWHLNKNAGDNIKNADFLNGFRKAMFTNFTPEEFEEFWSNLLKDTGLESNAWVAKTYENKLLWATAYLREKFFSRIRTTSQCEAINAIIKNYVRKKGCIYEFMHNFEQALLGYRNSELVADFKSKFTDPVLSSHLDLIEADAARIYTAEVFMEVKEQISKVVALIRKERFTMGDTKIYMLTKYCDSDYARQTAYDVSSQKLRCSCRLCESRGLPCSHIFYVMKEESIDHIPASLVLSRWTKDAKAGFLNMNSNEDVDSKMMEQARFSAYCFAFTAFCQKSSKKKGVYGDIMHDIMKLHQKYCDDEDPENEKVGDPKTVNGKGAPKRKKTRVKSIRHCKYCQSIHHDARNCPEKPEWADEDVAVDSVSINDSSSHKQKEQQWKGLRNIGVGRKLKDAKLFSLVVSFT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01765 759 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 56 708 IPR031052 GO:0006355
Tsu05g01765 759 Pfam FAR1 DNA-binding domain 77 145 IPR004330 -
Tsu05g01765 759 Pfam MULE transposase domain 266 360 IPR018289 -
Tsu05g01765 759 PANTHER OS02G0262500 PROTEIN 56 708 - -
Tsu05g01765 759 MobiDBLite consensus disorder prediction 658 680 - -
Tsu05g01765 759 ProSiteProfiles Zinc finger SWIM-type profile. 547 579 IPR007527 GO:0008270
Tsu05g01765 759 MobiDBLite consensus disorder prediction 1 44 - -
Tsu05g01765 759 SMART 26again6 554 581 IPR006564 GO:0008270
Tsu05g01765 759 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01765 Tsu-Chr5 18286240 18291380 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g01765 MULE 3e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01765 - - ccaj:109792835 802.357