Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01764 ATGACAACTTCATACCCCATTGTTGATTCTCTTCCTGTTGGATTCAGATTCAGACCAACAGATGAAGAGCTAGTTAACCACTACCTCAAAAACAAGTTACTTGGTAATGATTCCAGTGTCATAGCTGAAGTTGATTTTTGTAAGTTTGAACCTTGGGACTTACCAGACTCCAGATTTTTATGTGGGATGTTTAAATGGGTTGATGAAGAAGATTGTGTGGACCAACCTCAACATGATGTTGCTGCAATTGCTTTAGGTATTGTCGAAGATGTAAGAAAGGAGAATGAGAAGCTTCATAAGAAATTTAAATTTGCGGCCAATGTGGTCGCTGCGATGCGGTTGTGTTGCGGCATCACGTGTGATTTGAGTTCACACCGCAATTGCGGTCCGATGCCGTTGCAGTGCCTACCGCATCCCCAATATTGCGGCCGCATCACCTGA 441 0.4331 MTTSYPIVDSLPVGFRFRPTDEELVNHYLKNKLLGNDSSVIAEVDFCKFEPWDLPDSRFLCGMFKWVDEEDCVDQPQHDVAAIALGIVEDVRKENEKLHKKFKFAANVVAAMRLCCGITCDLSSHRNCGPMPLQCLPHPQYCGRIT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01764 146 SUPERFAMILY NAC domain 8 58 IPR036093 GO:0003677|GO:0006355
Tsu05g01764 146 Gene3D NAC domain 20 78 IPR036093 GO:0003677|GO:0006355
Tsu05g01764 146 ProSiteProfiles NAC domain profile. 11 146 IPR003441 GO:0003677|GO:0006355
Tsu05g01764 146 PANTHER NAC DOMAIN-CONTAINING PROTEIN 14-RELATED 11 56 - -
Tsu05g01764 146 Pfam No apical meristem (NAM) protein 12 58 IPR003441 GO:0003677|GO:0006355
Tsu05g01764 146 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01764 Tsu-Chr5 18274337 18277392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01764 8 56 NAC Transcription Factor Family AT3G49530 64.706 4.09e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu05g01764 NAM 5.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01764 - - mtr:MTR_8g023840 94.3597