Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01759 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAAGAACTTACTCTATGGGAAGAAATCATCGTCTAATTCAAAGTCTAGTTCATCGaagaaaaatgacatttttAAATCTTCGAGTAACAAGGATCCGTTGGGATCTTCTGAGTTAATTGTGTCTAATCCAATTCCAACTATGGATTCTTTAATGATATCACCACCGATATCTGGATCTAATGCTGCTAAAGGAGGGCTTTCAGAAAAGGAAGTAGTTAACGGGCCATCTCGTGAGAGGGATATTCTTTCAAATGGAGACGGAGAGGGTCGTGCGAAGGCTGTTGCTAATTTTGCATCTCAAGATGATCTTGAGACAGTCAGGCTTACAGAAGCAGCTATTAAACTTCAGTCTGCTTGCAGAGGCTATCAGGCTCGTCGGGAACTTCAAACACTCAAAGGTATCACACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTGTGAAGAGGATTGTTAAGTTCCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTTGAGGTCCTGAAAATTCGTAAGGATACCCAACTTTCAAAATCTATTGGCGTAGTTACATCTACAGAGGCAGAGAAGCTGTCAGAAAATGTCTTTGTTCACAAGTTGCTGGCGTCATCGCCCCATGCTTTTCCTCTATCTCTCAATAATGATCTCGGAGAACCTTACTTGGCTTGGAAGTGGCTTGATCGATGGACTCGGTCACACTTTTGGGCATCTCTTCCTAAATTGAAGAAACTTGACTCGGTGTCTGATGAAAAAAATATCAGTTGTCAAACAGTTGAAAAGGGACAAGCTAAAAGGAATTCCCGGAAGACTCCTTCCGTGAAAGCTGATGAAGGCTCAAGTTCAGGTTCTAACAAATATAAACAGCGTCCCAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGAACACccaaagaaagaaattgaaaaaagtAGTCTAAAAAAAACTCGCATGCAGAATGTTTCAGATAGATCTGAGGCAGTTaatgagaaaagaaaacaaagctCTAGGACAACTACAGATCATAATGTTACTGATGTCTCAGAGCAGGGGCCAAATTCCTCATCAGAGAAAATGAAAGATACGATGGTGCCGAAGTCAGAAGAGTCTTATCCTGAGAAAGTTCTTGGACAGAAAACACCAGAAGAGAATAATGATAAGCCAAAGAAGACCTTAAATGGTGGCGCCAAAGAAGAGAAAGGTcttggacaaaaaaaactagAAGAGAATAATGATAAGCCAAAGAAGAGCTTTAATGGCAGTGCGAAAGAAGAGAAAGGTCTTGGACAAAAAGCACTAGAAGAGAATAATGATAAGCCAAGGAAGAGTTTAAATGGGAGTACCAAAGAAGAGAAAGGTCTTGGACAGAAAGCACTTGAAGAGAATAGTGATAAGCCAAAGAAGAGTTTAAATGGCAGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCATTAGAAGAGAATAGTGATAAGCCAAAGAAGAGTTTAAATGGCAGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCACTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGCCAAAGAAGGGAAAGGTCTTGAACAGACAGCTCTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAGTGGCGGTGCCAAAGAAGAGAAAAGTCTTGGAAAGAAAGCACCAGAAGAGAAAGGTCATAATGATCCTACTGCTGTCTTACAGACTAGTGTGAAGAATGTAGGAGATGAAAAAATAGGAGTTAGCAAAGACTTAAATGGCGGTGACAAAATCATCAGCAACAATTACCAAAGAAGAGCTTCACTACCTGCTAATTTTAATGATCAAGAAAATGAGTTACATAACACTCCAAGATTGCCTAGTTATATGGCTCCTACTGAATCAGCAAAAGCTAGGCTAAGAGGACAAGGCTCCCCAAGATTTGCGACTGATGTTTTGGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCTTCTATTAACAGCAAGTCGGGATCTTTTTCCCCAAGAGCAGAAAAGCTGATAACTTTGAGCGGAAGAGGAATTGGGAGGACTGATAAATCTCTGTCATCTTCAAGGGACAAATCTCTGTCATCTTCAAGGGATGGGACTGATAAGATGACACAACCTCAGTGGAGAAGGTGA 2250 0.3973 MGKGRSPGKWIKNLLYGKKSSSNSKSSSSKKNDIFKSSSNKDPLGSSELIVSNPIPTMDSLMISPPISGSNAAKGGLSEKEVVNGPSRERDILSNGDGEGRAKAVANFASQDDLETVRLTEAAIKLQSACRGYQARRELQTLKGITQLQALIRGHLVRRQAVSALYCVKRIVKFQALARGYNVRRSDIGLEVLKIRKDTQLSKSIGVVTSTEAEKLSENVFVHKLLASSPHAFPLSLNNDLGEPYLAWKWLDRWTRSHFWASLPKLKKLDSVSDEKNISCQTVEKGQAKRNSRKTPSVKADEGSSSGSNKYKQRPKKDSNHSLVSAQEHPKKEIEKSSLKKTRMQNVSDRSEAVNEKRKQSSRTTTDHNVTDVSEQGPNSSSEKMKDTMVPKSEESYPEKVLGQKTPEENNDKPKKTLNGGAKEEKGLGQKKLEENNDKPKKSFNGSAKEEKGLGQKALEENNDKPRKSLNGSTKEEKGLGQKALEENSDKPKKSLNGSAKEEKGLGQKALEENSDKPKKSLNGSAKEEKGLGQKALEENNDKPKKSLNGGAKEGKGLEQTALEENNDKPKKSLSGGAKEEKSLGKKAPEEKGHNDPTAVLQTSVKNVGDEKIGVSKDLNGGDKIISNNYQRRASLPANFNDQENELHNTPRLPSYMAPTESAKARLRGQGSPRFATDVLDKNSLTRRHSLSSSINSKSGSFSPRAEKLITLSGRGIGRTDKSLSSSRDKSLSSSRDGTDKMTQPQWRR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01759 749 MobiDBLite consensus disorder prediction 311 365 - -
Tsu05g01759 749 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Tsu05g01759 749 MobiDBLite consensus disorder prediction 686 706 - -
Tsu05g01759 749 Pfam IQ calmodulin-binding motif 169 185 IPR000048 GO:0005515
Tsu05g01759 749 Pfam IQ calmodulin-binding motif 120 139 IPR000048 GO:0005515
Tsu05g01759 749 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Tsu05g01759 749 PANTHER IQ-DOMAIN 5-RELATED 1 409 - -
Tsu05g01759 749 SMART iq_5 118 140 IPR000048 GO:0005515
Tsu05g01759 749 SMART iq_5 141 162 IPR000048 GO:0005515
Tsu05g01759 749 SMART iq_5 166 188 IPR000048 GO:0005515
Tsu05g01759 749 Gene3D - 116 165 - -
Tsu05g01759 749 Pfam Protein of unknown function (DUF4005) 643 710 IPR025064 -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 387 594 - -
Tsu05g01759 749 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 410 731 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 281 626 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 64 98 - -
Tsu05g01759 749 PANTHER IQ-DOMAIN 5-RELATED 410 731 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 1 51 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 727 749 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 83 97 - -
Tsu05g01759 749 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Tsu05g01759 749 MobiDBLite consensus disorder prediction 642 749 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 16 51 - -
Tsu05g01759 749 MobiDBLite consensus disorder prediction 366 386 - -
Tsu05g01759 749 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01759 Tsu-Chr5 18187419 18193141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01759 631 749 IQD Protein Family AT1G14380 45.902 1.87e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01759 - - mtr:MTR_5g038620 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01759 05 18187419 18193141 Tsu05g01759 05 18187419 18193141 ECH
Tsu05g01759 05 18187419 18193141 Tsu04g03671 04 45745724 45754743 ECH
Tsu05g01759 05 18187419 18193141 Tsu04g03671 04 45745724 45754743 PCT