Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01758 ATGAAGAATTTCTTGGTTTCTTTATACTTCTTGTTTCCTACAATCTTTACAATTATTCTTGTGTTACTAACACCAATTCCTAGTGCACAATTAACACCAAGTGAAACTAGAattcttcttcaacttcaaacaCTTCTTGAATATCCACAAGTTCTTCAAAAATGGAACAATCTCACCAGCTTCTGCAACATTCCTCCATCACCATCTTTTAACATTATCTGCTCAAAGAATCATATAACAGAATTAACCATCATTGGTAACAAAACAAGGCCAGTTTCTTGGAATACAAGTAACACTCTTTCACAAAGATTTTCTATTGAatcttttattactattttaacAAAGCTTTCAAATATGAAAGTTTTGTCATTGGTGTCACTTGGTTTGTGGGGTACATTACCTTCAAAAATCACTAGGTTTAAGTCACTTGAAGTTTTCAACATTTCATCGAATTTTTTGTATGGAAATATTCCATCATCAGTTTCTTCAATGACAAGTCTCAAGAGTCTTGTTTTGGCTGATAATTTTTTCAATGGAAGTGTTCCTAATCTTGAAAGattagtctttcttgaagagaTTAATTTTGATAACAACAGATTAGGACCTGAATTTCCTTCATATTTGTTCTCTCTTCCTTTGTTAAATCACCTAAACTTGGCTTCAAATCAACTCAATGGTTCAATTTCTTTGAATATATCTTGTGATTCTGCTCTAACATTTGTGGACATCTCAAACAATTTTCTAGAAGGAAATTTGTCATCCTGCATTGATTCAAATTCGTTGAATCGAACAATAGTCTATTCCGGTAATTGCTTATTAAGCAGAAATCTCAGTGATCAACATCCATCTTCATATTGCAATAAATCACCGGCCTTTTCCACTATGCCGACAAGATTTGAGAGACGGAATGAATCAAAGATGCAACTAGGATCAGTACTTGGTATTGTTGGAGGTTTTGTCGGAATCGTAGGACTTATGATTCTACTTTTTCTGTTCATTTTGAAAAAGTCCAAAACAGAAAGAGCAGTAAAATCTGTTGATGATAAAGTTTATGTCACTGCAGATTCAAGACCAAATATTTATACAAGGAGTAATGTTCCAAAGTTAATGAGGCTAGCTTCAATTGGATTAAGACCATACAACATTTTCACAatagaagaaattgaagatgcaACCAATAACTTTGATCCATCAAATCTAATAGGAGAAGGATCACAAGGACAGCTATATAAAGGTAGGATCAAAGATGGTTCAATGGTGATGGTTAATATTGTAAAGTTAAAGCAGAAGAGTTTGAGCAAAATCAGTGATGAAAATTTGAAGGTATTACCTTGTTTAAGGCATAGGCATTTGGTGAGTGTATTAGGACACTGTGCCATTACTTATCAGGACAATCCCAACATTACAAGCACAATATTCATTGTATTTGAGCATATCTCAAATATGTCATCATTGAGGATTCATCTTACAGATAGGAGCAAAATGCTGAAGTGGAAACAAAGAATGACAATCATGATAGGCATTGGAAGAGGAATTCAATACTTACATAGAGGAGTTAATCATGGAATATTTGGAAACAACATAAAGATTGAGAATATTTTATTGGACAATAATCTTAATCCAAAAGTTAGTGGATATAGCATTCCATTTCCATCCAAGAAAGGTtctgaaaagaaaattaaaggaCAAAATGCACACAATCATATTGGCAGCATCAATAATGCAGAAAAGGAAGACATATATCAATTTGGTGTGATTCTACTTGAAGTTATCACTGGGAAACTAATTACATCTTCTATTGAAGTAGAAGTTTTGAAATATGAGCTTGAGAGAGGTTTATCTGAAGTTGCATCACCAACTGCATTGAGCAGCGCAATCGATGCTTCTCTTCATGGAACTTATACACAAGAATCGTTAAAGACTGCAATTCAGATTACCAGCAATTGTCTCAACAAGGTTCCCGGTAATCGTCCTTCGATAGAAGACATTCTCTGGAATCTGCAGTACTCTATGCAAGTTCAAGAGGCAAGGTCTAGCAAAACATCATCATGA 2052 0.3255 MKNFLVSLYFLFPTIFTIILVLLTPIPSAQLTPSETRILLQLQTLLEYPQVLQKWNNLTSFCNIPPSPSFNIICSKNHITELTIIGNKTRPVSWNTSNTLSQRFSIESFITILTKLSNMKVLSLVSLGLWGTLPSKITRFKSLEVFNISSNFLYGNIPSSVSSMTSLKSLVLADNFFNGSVPNLERLVFLEEINFDNNRLGPEFPSYLFSLPLLNHLNLASNQLNGSISLNISCDSALTFVDISNNFLEGNLSSCIDSNSLNRTIVYSGNCLLSRNLSDQHPSSYCNKSPAFSTMPTRFERRNESKMQLGSVLGIVGGFVGIVGLMILLFLFILKKSKTERAVKSVDDKVYVTADSRPNIYTRSNVPKLMRLASIGLRPYNIFTIEEIEDATNNFDPSNLIGEGSQGQLYKGRIKDGSMVMVNIVKLKQKSLSKISDENLKVLPCLRHRHLVSVLGHCAITYQDNPNITSTIFIVFEHISNMSSLRIHLTDRSKMLKWKQRMTIMIGIGRGIQYLHRGVNHGIFGNNIKIENILLDNNLNPKVSGYSIPFPSKKGSEKKIKGQNAHNHIGSINNAEKEDIYQFGVILLEVITGKLITSSIEVEVLKYELERGLSEVASPTALSSAIDASLHGTYTQESLKTAIQITSNCLNKVPGNRPSIEDILWNLQYSMQVQEARSSKTSS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01758 683 Gene3D Transferase(Phosphotransferase) domain 1 481 682 - -
Tsu05g01758 683 SUPERFAMILY Protein kinase-like (PK-like) 376 667 IPR011009 -
Tsu05g01758 683 SUPERFAMILY L domain-like 45 272 - -
Tsu05g01758 683 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 207 680 - -
Tsu05g01758 683 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 206 - -
Tsu05g01758 683 Pfam Protein kinase domain 398 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01758 683 Gene3D Ribonuclease Inhibitor 32 304 IPR032675 -
Tsu05g01758 683 PANTHER OS07G0166700 PROTEIN 207 680 IPR045272 GO:0004714|GO:0006468
Tsu05g01758 683 PANTHER OS07G0166700 PROTEIN 3 206 IPR045272 GO:0004714|GO:0006468
Tsu05g01758 683 ProSiteProfiles Protein kinase domain profile. 395 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01758 683 Gene3D Phosphorylase Kinase; domain 1 370 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01758 Tsu-Chr5 18175083 18177957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01758 48 676 Miscellaneous Gene Families AT3G03770 36.264 1.67e-150 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Tsu05g01758 Pkinase 9.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01758 - - mtr:MTR_5g038600 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01758 05 18175083 18177957 Tsu05g01758 05 18175083 18177957 ECH