Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01699 ATGCATCACTCTGTTTCAGATTCTGAACCTAGTTGTCAAAGTGATGTTCTTACTTACCTTAATGAAATTCTCACTTTAGGTATCGAAGTTGAATGGGATCAAGCTTTAACACAAGACACTTACTTCACAAATTGCAGCAATTGCATCAACAACAACGGTTTCTGTGGTTTCAATTCTTCAGACCCGAATCAGCACTTCCTTTGTTACCAATCAAGATCAACTTTTTCACCACCGTGGATTCGGAAAACGAAGCTTAACAAAATCGCGATTTTCGCTATTATTATAGCTTTCGCTTCGTTGATTCTGTTTCTCTCTGTTATCATTTCAATTCTCCGATCGAGAAAGTTAAACACCGCGGTGGAGGAAGATCCGACCACTGTCTTCCTCCACAACCACCGCAACGCGAATCTATTCCCACCGGTTTTCACCTACGACGAATTAAACATTTCCACAAACAACTTCGATCCGAAGCGAAAAATCGGCGACGGCGGATTCGGCTCTGTTTATCTCGGAAACCTCCGTGACGGAAAACTCGCCGCCGTGAAACATCTTCACCGGCAAAATCATACAGCGGCATTCTCATCAAAATCATTCTGCAACGAGATTCTGATTCTATCATCAATCGATCATCCAAATCTCGTTAAACTTCACGGTTACTGTAGCGATCCAAGAGGTTTGATTCTCGTTTATGATTACATCCCTAACGGAACCCTAGCGGAGCATCTTCACGGTTTGAAGAGTAAACGGTACGGTTATAAGCTGACGTGGCAAACGCGGCTTGAGATTGCAATTCAAACGGCGTTAGCTATGGAGTATCTTCATTTCTCAGTTAAACCACCGATAGTTCACAGAGATATAACGtcgtcaaatatttttattgagaaAGATATGAGAATTAAAGTCGGTGATTTTGGATTATCGAGGTTGTTAGTTTTGCAAGAAACGAATAATCAAACGACCTCGTCTAGTGGTTTTGTTTGGACCGGTCCACAAGGTACACCGGGTTATTTAGACCCGGATTATCATCGCTCTTTTCGATTAACCGAAAAGAGTGACGTGTATAGTTTTGGTGTGGTTTTGCTTGAGCTAATTACGGGGCTTAAAGCGGTTGATTATTGTAGAGATAAACGCGAGATGGCACTTGCTGACATGGTCGTTTCGAGGATTCACACGGGTCAATTGAAAGAGGTACTTGACCCGGTACTTGATTTAGGTAACGACGGTGAAATGCTTAGTGCAGTGGCTGCTGTGGCGGAGTTGGCTTTTCGATGTGTTGCATCGGATAAAGATGATCGACCCGATTCAAAGGAGGTTGTGGAGGAGTTGAAACGGGTTCGATTACGAACGTCAATGAATGGTGACGTGGCAAAGGTGTGA 1377 0.427 MHHSVSDSEPSCQSDVLTYLNEILTLGIEVEWDQALTQDTYFTNCSNCINNNGFCGFNSSDPNQHFLCYQSRSTFSPPWIRKTKLNKIAIFAIIIAFASLILFLSVIISILRSRKLNTAVEEDPTTVFLHNHRNANLFPPVFTYDELNISTNNFDPKRKIGDGGFGSVYLGNLRDGKLAAVKHLHRQNHTAAFSSKSFCNEILILSSIDHPNLVKLHGYCSDPRGLILVYDYIPNGTLAEHLHGLKSKRYGYKLTWQTRLEIAIQTALAMEYLHFSVKPPIVHRDITSSNIFIEKDMRIKVGDFGLSRLLVLQETNNQTTSSSGFVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELITGLKAVDYCRDKREMALADMVVSRIHTGQLKEVLDPVLDLGNDGEMLSAVAAVAELAFRCVASDKDDRPDSKEVVEELKRVRLRTSMNGDVAKV 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01699 458 SUPERFAMILY Protein kinase-like (PK-like) 136 442 IPR011009 -
Tsu05g01699 458 Pfam Protein tyrosine and serine/threonine kinase 157 442 IPR001245 GO:0004672|GO:0006468
Tsu05g01699 458 Gene3D Transferase(Phosphotransferase) domain 1 233 456 - -
Tsu05g01699 458 CDD STKc_IRAK 160 444 - -
Tsu05g01699 458 ProSitePatterns Tyrosine protein kinases specific active-site signature. 281 293 IPR008266 GO:0004672|GO:0006468
Tsu05g01699 458 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.5 7 451 - -
Tsu05g01699 458 ProSiteProfiles Protein kinase domain profile. 154 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu05g01699 458 Gene3D Phosphorylase Kinase; domain 1 130 232 - -
Tsu05g01699 458 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 7 451 IPR045274 GO:0007166
Tsu05g01699 458 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01699 Tsu-Chr5 17354874 17356934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01699 8 457 Receptor kinase-like Gene Family AT1G69910 62.179 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu05g01699 PK_Tyr_Ser-Thr 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01699 - - cam:101489033 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01699 05 17354874 17356934 Tsu05g01699 05 17354874 17356934 ECH