Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01696 ATGGGTACAAGTGACTTGAAGCTTTTGAGTACACCATCCAGTCCATTTGCATTGAGAGTAAAAATTGCCCTTAACATCAAAGGATTGGATTATGACAACATTGTAGAAACCATGAATCCTAAAAGTGACTTGCTTCTTCAATCCAACCCTGTTTACAAAAAAATCCCAGTTTTAATTCATGGTGATAAATCCATTTCTGAATCTGCAATCATAGTTGAATACATTGATGAAGTTTGGAAAAATAATGGTACTCCTATCCTTCCTTCAAATGCTTATGACCGCGCCATTGCGCGATTTTGGGTTGCCTACATCGATGACAAGTGGTATAATTCCTCAAAAAATCTTTTGGTTGCTCAaaatgatgaatcaaagaaggcATGTTTTGAGCAAGTGGAAGAAGTACTTTTAAGGTTAGAAGATGTGCTCAACAAGTACAGTGAAGGAAAGGACTTTTTTGGAGGAGAGAACATTGGATTTCTTGATATTTGTTTTGGGAGCTATTTGAGTTGGTTAAGGGTCACAGAGAAAGTGATAGGAAAAAAAGTGCTTGATGAAACAAAGACTCCTGCATTGGTTAAATGGGCTGAAGCTTTTGTTGCTCATCCTGCTGTGAAGGGAAATCTGCCAGAAACTGATAAGCTTTTGGTGTTTGCAAAGAGTTTGGTGCAAAGAATGGTTGCTGCTGCTACTCCTAAGTAA 699 0.3691 MGTSDLKLLSTPSSPFALRVKIALNIKGLDYDNIVETMNPKSDLLLQSNPVYKKIPVLIHGDKSISESAIIVEYIDEVWKNNGTPILPSNAYDRAIARFWVAYIDDKWYNSSKNLLVAQNDESKKACFEQVEEVLLRLEDVLNKYSEGKDFFGGENIGFLDICFGSYLSWLRVTEKVIGKKVLDETKTPALVKWAEAFVAHPAVKGNLPETDKLLVFAKSLVQRMVAAATPK 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01696 232 SFLD Main.3: Omega- and Tau-like 3 228 IPR045073 -
Tsu05g01696 232 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Tsu05g01696 232 SFLD Glutathione Transferase (cytosolic) 3 228 IPR040079 -
Tsu05g01696 232 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Tsu05g01696 232 CDD GST_C_Tau 91 219 IPR045074 GO:0004364|GO:0006749
Tsu05g01696 232 Gene3D Glutaredoxin 2 86 - -
Tsu05g01696 232 CDD GST_N_Tau 6 79 - -
Tsu05g01696 232 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Tsu05g01696 232 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 219 - -
Tsu05g01696 232 Pfam Glutathione S-transferase, C-terminal domain 96 202 IPR004046 -
Tsu05g01696 232 SUPERFAMILY GST C-terminal domain-like 77 225 IPR036282 -
Tsu05g01696 232 SUPERFAMILY Thioredoxin-like 5 109 IPR036249 -
Tsu05g01696 232 Gene3D - 87 230 - -
Tsu05g01696 232 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01696 Tsu-Chr5 17335324 17336819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01696 1 227 Glutathione S-transferase Gene Family AT1G10360 54.185 6.81e-85 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01696 K00799 - gmx:547576 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01696 05 17335324 17336819 Tsu05g01688 05 17217232 17218794 PCT