Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01688 ATGGCTACAAGTGACTTGAAGCTTTTGGGTGGCTGGTTCAGTCCATTTGCTTGTAGGGTACAAATTGCCCTTAGCATCAAAGGTTTGGATTATGAGAACATTGAAGAAAACTTGAATCCCAAAAGTGACTTGCTTCTTCAATCCAACCCCACATACAAGAAAATCCCAGTTCTCATTCATGGAGATAAAACCATTTGTGAGTCTGCAATCATAGTTCAATATATTGATGAAGTTTGGAAAAATAATGCTACATCTTCAATCCTTCCTTCAAATGCTTATGACAAAGCCATTGCTAGATTTTGGGTTTCCTACATCGATGACAagTTCTTTAATTCCTTGAGAAATGGTTTATTTGCTCAAGATGATGAGTCAAAGaagaaatattttgatgaaCTAGAAGAAGTGCTTTTGAAGTTGGAAGAAGTGTTCAACAAGTTGAGTGAAGGAAAGGGCTTTTTTGGAGGAGAGAAAATTGGATTTATTGATATTGCTTTGGGATGCTATTTAAGTTGGTTAAAGGTCAAAGAGAAATTTACAGGAACTAAAATGTTTGATGAAGCTAAGAATCCTGGTTTGGTGATATGGGCTGAGACTTTTTCAGCTCATCCTTCTGTGAAAGGGATTCTGCCAGAAACTGATAAGCTTGTTGAGTTTGCCATAGCTATGGCACAAAGATTGGCTGCTGCTGCCGCCGCTCCTCCTAAGTAA 708 0.3743 MATSDLKLLGGWFSPFACRVQIALSIKGLDYENIEENLNPKSDLLLQSNPTYKKIPVLIHGDKTICESAIIVQYIDEVWKNNATSSILPSNAYDKAIARFWVSYIDDKFFNSLRNGLFAQDDESKKKYFDELEEVLLKLEEVFNKLSEGKGFFGGEKIGFIDIALGCYLSWLKVKEKFTGTKMFDEAKNPGLVIWAETFSAHPSVKGILPETDKLVEFAIAMAQRLAAAAAAPPK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01688 235 CDD GST_C_Tau 92 219 IPR045074 GO:0004364|GO:0006749
Tsu05g01688 235 Gene3D - 88 231 - -
Tsu05g01688 235 Gene3D Glutaredoxin 1 87 - -
Tsu05g01688 235 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 220 IPR045073 -
Tsu05g01688 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 218 IPR010987 -
Tsu05g01688 235 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 220 - -
Tsu05g01688 235 Pfam Glutathione S-transferase, C-terminal domain 94 203 IPR004046 -
Tsu05g01688 235 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Tsu05g01688 235 SFLD Main (cytGST) 2 230 - -
Tsu05g01688 235 CDD GST_N_Tau 6 79 - -
Tsu05g01688 235 SUPERFAMILY Thioredoxin-like 5 110 IPR036249 -
Tsu05g01688 235 SFLD Main.3: Omega- and Tau-like 2 230 IPR045073 -
Tsu05g01688 235 SUPERFAMILY GST C-terminal domain-like 77 225 IPR036282 -
Tsu05g01688 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01688 Tsu-Chr5 17217232 17218794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01688 1 219 Glutathione S-transferase Gene Family AT1G10360 53.881 1.83e-80 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01688 K00799 - gmx:547576 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01688 05 17217232 17218794 Tsu05g01688 05 17217232 17218794 ECH
Tsu05g01696 05 17335324 17336819 Tsu05g01688 05 17217232 17218794 PCT
Tsu05g01688 05 17217232 17218794 Tsu05g01689 05 17226652 17228757 PCT