Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01677 ATGAACCAACAAAAAATTCCTTCATCTCGAAATTTTCGACTCGGCCGAGTCAAGCCACAACCTCCCGGTAACCGCACAATCTTCTGTAACGATCGTCAAGCCAATCTCCTTACTCGATTCAAGGGGAATTCAATATCCACTACAAAGTACaactttttcacttttttaccAAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCTAATCTCTATTTCCTTACAATCTCAATTTTGTCTACCACACCAATCAGCCCTGTGTCTCCGATCACTAATGTGCTTCCTCTATCTATGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGATTGGAAACGGTTTCAAAATGACATGGCCGTAAACAATAAGAGGGTCCATGTTTTGCAAGATAAAGAGTGGGTGTCTATATCATGGAAAAAACTGCAAGTTGGAGACATTGTTAAGGTTAAGCAAGATGGATTCATTCCTGCAGATTTGCTTTTCCTAGCTAGTACAAATGTAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGAGAAACCAATTTGAAGATCAGAAAAGCATTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCCTCTGAATTTAAAGGTGAAATTCAGTGTGAACAGCCAAACAATTCATTGTATACCTTCACTGGAAATCTTATAATGCAAGACCAAACACTTCCTCTCAGTCCAAATCAACTTCTGTTGCGaGGATGCAGCCTCAGGAATACAGGACATATTGTCGGGGTTGTTATTTTCACAGGGCATGAAACAAAGGTTTCTACTATGAGATGA 810 0.3975 MNQQKIPSSRNFRLGRVKPQPPGNRTIFCNDRQANLLTRFKGNSISTTKYNFFTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSMVLLLSLIKEAFEDWKRFQNDMAVNNKRVHVLQDKEWVSISWKKLQVGDIVKVKQDGFIPADLLFLASTNVDGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLIMQDQTLPLSPNQLLLRGCSLRNTGHIVGVVIFTGHETKVSTMR 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01677 269 Pfam E1-E2 ATPase 122 266 - -
Tsu05g01677 269 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 266 - -
Tsu05g01677 269 MobiDBLite consensus disorder prediction 1 21 - -
Tsu05g01677 269 Gene3D - 104 269 - -
Tsu05g01677 269 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 91 189 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu05g01677 269 SUPERFAMILY Calcium ATPase, transmembrane domain M 32 258 IPR023298 -
Tsu05g01677 269 Pfam Phospholipid-translocating ATPase N-terminal 27 91 IPR032631 -
Tsu05g01677 269 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 8 266 - -
Tsu05g01677 269 SUPERFAMILY Calcium ATPase, transduction domain A 122 267 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01677 Tsu-Chr5 17018120 17028442 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01677 3 265 Primary Pumps ATPases AT1G59820 77.567 7.80e-149 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01677 K14802 - lja:Lj0g3v0164329.5 460.299