Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01653 ATGGCAACCAACAATGCTGAAACCAATCTTGCTTTAGAGAGTCAAAGAGGTATACTGGGTGCCATTATGCTTCCACAGATGTTTTCCAGTGATTTTGGAGATGAGATATATCGCTTTGTGACTTTGATTGACTCACGTCAAAATCAGTTCAAAATTATGGTGGAAAAAGTCAATAACAATGTTTATTTTACGCGCGGTTGGGCTTCCATCCGTGATTTCTACAACATACGAATTGGTGCTTGGTTGTCTTTGATGTATACTGGTCTGGGGCAATTTGGACTTAGTTTGCATACTAGGTTTCAACAGTTAATCACTCCTCCTGTATGTGATCCCCCTATGAGATTTGTTTTAGACAAATCTTGTGTGCCTAAGAACTTTGTTGGTGGTTTGCCTTCCTCCATTGAACGTCTCTCTTATTCCCACCAGGATTCCTTTTTCCATTTTGTTCATGAGAAAGCCCTTACTTACTATGATGTCTCTACTGGGCTTTTGACACTTCCTTACGACGGGTTTGGTGAGTTTGTTTTCGAAGAGGCTGCAACGTCCATTAGGTTGGTGGATGAATGTGGTAATTTATGGACATGTGATTTGACATTGCTCACTTTTCCTTGCAAGCATTTCAAAATTGGAGGGGACTGGAGCCGAATGGTTTCTACTAGAAGATTGTCTATTGGTGTGTCTGTTAAGATCGGTGCTCCCGCCGGTGATCACAatgaatcaatttattttatgctcACTCTTTAG 744 0.4019 MATNNAETNLALESQRGILGAIMLPQMFSSDFGDEIYRFVTLIDSRQNQFKIMVEKVNNNVYFTRGWASIRDFYNIRIGAWLSLMYTGLGQFGLSLHTRFQQLITPPVCDPPMRFVLDKSCVPKNFVGGLPSSIERLSYSHQDSFFHFVHEKALTYYDVSTGLLTLPYDGFGEFVFEEAATSIRLVDECGNLWTCDLTLLTFPCKHFKIGGDWSRMVSTRRLSIGVSVKIGAPAGDHNESIYFMLTL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01653 247 SUPERFAMILY DNA-binding pseudobarrel domain 149 225 IPR015300 -
Tsu05g01653 247 SUPERFAMILY DNA-binding pseudobarrel domain 20 92 IPR015300 -
Tsu05g01653 247 Gene3D - 9 99 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01653 Tsu-Chr5 16471841 16472923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01653 22 94 B3 DNA Binding Superfamily AT3G18990 31.507 3.36e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01653 - K02602 mtr:MTR_4g032560 196.052