Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01647 ATGATTGATTTCCCTCCTTCATTATTCATTCTCATTTCTTTCGCGCCATTCTTTCTGTTCGTTCACAGCTCAGATTCTTTTCTTCACAGTTCGCGATTCTCTCTTCGTCGAGCTCGAACTTTACACAAAGTTTGTAGACCAGTGAAAATACTCAACATGTATGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGAGAAAAGGGTCAGCTCACACCGTTTAATAATGACTTGTTTGACCAAGTAGTTGCAGAATGCAACCAACATCACGGTGAGCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAGACGGCTAGAAATGCTGACCACTATGGAGCCCTCATCCACCTATTTTCTATAGTCCGAAATAAACGTTGTCTAACAGCCTATGTGTATAACCGAGCAGAAACTATACGGAACTTGTTATGGAAGATAGGGCCCGTGATTCCtaaagaaattgaagagaagCTTAATCATTGGGAGGAAGAGTATTTCAAGAAGCATTCTGCAGCATTGAAATCTTATATGTCAAAAGTTCTGGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCATACATACAAGTAAGGGTCCTTGAAGACATAAGAGAAGGCATTGTACTTAGCGATGATAAAAATCCCAACTTTGCCCGACATTCCATGCACTTTCTGAAACGAACTGATGCTGAGAAATATATCTCCAGGGGCTTAATGGAGGAGCTCACTGGTTGA 756 0.4061 MIDFPPSLFILISFAPFFLFVHSSDSFLHSSRFSLRRARTLHKVCRPVKILNMYGRKACQLVKEFASGEKGQLTPFNNDLFDQVVAECNQHHGELQSLIRKMQEEGLDVQTARNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKIGPVIPKEIEEKLNHWEEEYFKKHSAALKSYMSKVLVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFLKRTDAEKYISRGLMEELTG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01647 251 SUPERFAMILY GINS helical bundle-like 53 198 IPR036224 -
Tsu05g01647 251 Gene3D - 53 186 - -
Tsu05g01647 251 CDD GINS_A_psf1 55 186 IPR005339 GO:0000811|GO:0006260
Tsu05g01647 251 Pfam GINS complex protein 99 168 IPR021151 -
Tsu05g01647 251 PANTHER PARTNER OF SLD5 53 247 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01647 Tsu-Chr5 16396290 16399964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01647 53 251 Core DNA Replication Machinery Family AT1G80190 69.802 1.09e-103 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01647 K10732 - qsu:112021696 333.954