Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01641 ATGGCTTTCAACATTATGTTTCTTCTAAGACTTGTTCTTGTTTCACAAATTTTTCTAATACCATCTTTCTATTGCCAAACAAATTCACCTCAAAACCAAAACATAGAAACTTCATATCCAATTGAAGCTCAAGAACAACCAAAATCAACACAACCTAAGCCACAAGaatcatcaccaccaccatcatcatcacaaGCACCAATAgcatcaccatcatcaacaaaatcatcttcaaatagtaaaatagtaacTGCTGTAGCTGCAACTGCAACAGGAACATTAATTCTTTCTGCTctaattttcttctttgttaTGAAGTGCTTTAaagcaaagaaaagaaatgtCATAGTAAACAATAACAATACTTCTTCTTTAGGTCATAGAAATGTTATGCCTCAAGTTAAAGTGATTGAGAAAATGGAAGGTAAAATCAAAGGACTTATTGTTGATGAAGATGGTTTAGATGTTGTTTATTGGAGAAAACTTCAAGATCAAAACTCTAATAAGGATTTACAAAAAGGTACTGTTTTGGATAGTcctaaaaacaaacaatattaTGATCACAGTCATCATGAAGAAAATCAAGAAATTCATTTGCTTAGAGGAAAATCTTCAACCTCACAAATGAATATATTTCCACAAGAATCATCATATACAATTATGAAAATTACACCTCCTGCACCTCCTCCTATTATTCCTACTCAACCATTTTCTTTAAACCTTCTTCCTTCATCACCGAAACGTCTAAAACCACCCTCTACTTCTTTCTCATCAATTCCGAAACATTCAAATCCTTTTGTCTCATCGATTCCGAATATGGAAAATGATGTAACACCAATAATATCTGATGATAGAAAGAGTCAAAAACCACCGccacctcctcctcctccaccaaTACCTGATAGAAAAAGTTCAACACCGAcgcctcctcctcctcctccaccaaTTACAAACAGAAAGAGTTCTGCAACACCGccaccaccacctcctcctCCAGTAACTACTGGAAAGATTCCTGCTCCACCACCTCCGCTACCACCGAAGAAAGGTGGATTGAAATTGAAGTCATCATCAAAACCACCACCTACTCCTGTTGAAACATCTTCAAGTGAAGTAAAAATGAAACCATTGCATTGGGATAAGGTGAATACTAATCTTGATCATTCTATGGTGTGGGACAAAATCGACCGTGGTTCATTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGATTGTCGCATCCAATTCAAAGAAATCAAATGGTAACACTTCAAAAGGAAAGGAATCAACAAGTCCAAACAGGGATGCATCAACAAATGCTTTCATTCTTGACCCTAGAAAATCACAAAACACTGCTATAGTTTTGAAATCTCTTGCAATCTCACGAAAAGAAATCATCGAAGCACTTATTGATGGTCAAGGCCTCAATGCAGATACGATTGAAAAACTTTCAAGAATAGCTCCAACAGAAGAAGAACAATCCCAAATACTTGAATATGAAGGAGACACAACAAAACTTGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGCTGTTCCTTCGGCATTTAAGCGCTTGAATGCAATTCTATTCAGGTTGAATTATGACTCGGAGATTGTAGAAATCAAGGAGTTTCTGCAGACCCTTGAGCTCGCATGTAAGGAGCTTCGAAACCAAGGAGTTTTTGTGAAGCTTCTTGAAGCAGTTCTTAAGGCCGGAAACCGTATGAACGCAGGTACTAATAGAGGTAACGCTCAAGCTTTCAACTTGGTTTCTCTAAGGAAACTCTCTGATGTTAAGAGTGTTGATGGAAAAACTACATTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGTTCCGAAGGAAAACGCGCGGTTCTTAACCGCAATCACAGTTTGAGTCGTAGTTTCAGTAGGAGCAATAGCAGCAGCAGCATTGGAGACTCTAAGAATTCTGCTACTTCAAAGGAACAAAAACAAAGGGAATATACAACACTAGGATTACCAATTGTAGGAGGGGTCAGTGCTGAGTTTTCCAATGTAAAGAAAGTTGCTCAAACAGATTACAATAGTTTTGTTGGTTCTATCTCAGCACTCTTGGCAAAGATAGTTGAAATTCGACAACTTGTTTCGCAGTGtggaaataatgataaagaaGGAAAGTTTGTAAGAGAGATGAACCATTTTCTTGAAAATGCTGAAAAGGATTTGCAATTGGTGAGTGAAGAACAAACAAGGGTAATGCAGCTTGTTAAGAGAACAACAGATTATTATCAAGGTGGAGCTTCAAAAGACAATGCAAGAGAACAGGCCCTTTATCTATTTGTTATAGTCAAGGATTTTCTTGGAATGGTTGATCAAGCCTGCATAGAGATCACTCGAAACATGCAGAAAAAGAAGACATCTAAGGCAAAGTCTTAA 2427 0.3424 MAFNIMFLLRLVLVSQIFLIPSFYCQTNSPQNQNIETSYPIEAQEQPKSTQPKPQESSPPPSSSQAPIASPSSTKSSSNSKIVTAVAATATGTLILSALIFFFVMKCFKAKKRNVIVNNNNTSSLGHRNVMPQVKVIEKMEGKIKGLIVDEDGLDVVYWRKLQDQNSNKDLQKGTVLDSPKNKQYYDHSHHEENQEIHLLRGKSSTSQMNIFPQESSYTIMKITPPAPPPIIPTQPFSLNLLPSSPKRLKPPSTSFSSIPKHSNPFVSSIPNMENDVTPIISDDRKSQKPPPPPPPPPIPDRKSSTPTPPPPPPPITNRKSSATPPPPPPPPVTTGKIPAPPPPLPPKKGGLKLKSSSKPPPTPVETSSSEVKMKPLHWDKVNTNLDHSMVWDKIDRGSFRVDDDLMEALFGIVASNSKKSNGNTSKGKESTSPNRDASTNAFILDPRKSQNTAIVLKSLAISRKEIIEALIDGQGLNADTIEKLSRIAPTEEEQSQILEYEGDTTKLAAAESFLYHILKAVPSAFKRLNAILFRLNYDSEIVEIKEFLQTLELACKELRNQGVFVKLLEAVLKAGNRMNAGTNRGNAQAFNLVSLRKLSDVKSVDGKTTLLHFVVEEVVRSEGKRAVLNRNHSLSRSFSRSNSSSSIGDSKNSATSKEQKQREYTTLGLPIVGGVSAEFSNVKKVAQTDYNSFVGSISALLAKIVEIRQLVSQCGNNDKEGKFVREMNHFLENAEKDLQLVSEEQTRVMQLVKRTTDYYQGGASKDNAREQALYLFVIVKDFLGMVDQACIEITRNMQKKKTSKAKS 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01641 808 SMART it6_source 364 802 IPR015425 -
Tsu05g01641 808 MobiDBLite consensus disorder prediction 417 440 - -
Tsu05g01641 808 Coils Coil 725 745 - -
Tsu05g01641 808 MobiDBLite consensus disorder prediction 225 376 - -
Tsu05g01641 808 Pfam Formin Homology 2 Domain 369 787 IPR015425 -
Tsu05g01641 808 MobiDBLite consensus disorder prediction 286 349 - -
Tsu05g01641 808 MobiDBLite consensus disorder prediction 637 663 - -
Tsu05g01641 808 PANTHER FORMIN-RELATED 8 805 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Tsu05g01641 808 MobiDBLite consensus disorder prediction 43 77 - -
Tsu05g01641 808 PANTHER FORMIN-LIKE PROTEIN 4 8 805 - -
Tsu05g01641 808 Coils Coil 542 562 - -
Tsu05g01641 808 Gene3D Formin, FH2 domain 385 808 IPR042201 -
Tsu05g01641 808 SUPERFAMILY Formin homology 2 domain (FH2 domain) 443 805 - -
Tsu05g01641 808 ProSiteProfiles Formin homology-2 (FH2) domain profile. 364 808 IPR015425 -
Tsu05g01641 808 MobiDBLite consensus disorder prediction 237 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01641 Tsu-Chr5 16350522 16353184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01641 26 804 FH2 protein (formin) Gene Family AT1G70140 43.719 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01641 - - gmx:100780368 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01641 05 16350522 16353184 Tsu05g01641 05 16350522 16353184 ECH