Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01568 ATGGCTGAAGCTGTGCTTGAACTTGTGCTTCACAATTTGAGCTCACTCATTCACAAGGAGATTGGCCTATTTCTGGGTTTCGAACAAGACTTTAAAAGTCTTTCAAGCTTGCTCACTACAATCAAGGCTACTCTTGAAGATGCTGAGGAGAAACAATTCACTGATAGAGCTATCAAAGATTGGCTGCTAAAGCTTAAAGATGCTGCTTACGTCCTCGACGACCTCTTGGACGAGTGTGCCACCAAAGCACTAGAGTTGGAGTACAAAGGATTCAAGGGTGGACTAACTGATAAGGTACAAAGCTCTTGCATATCTTCTTTCCATCCAAAGCATGTTGCTTTCCGTTACAAAATTGCTAAGAAAATGAAGAATATAAGGGAGAGATTGGATGAAATAGCTGAAGAAAGGACCAAGTTTCATTTGAATGAGATAGTCAGAGAGAGAAGTAGAGTCATTGAGTGGCGTGAAACCACCTCGATCATCACTCAAAATCAGGTCTATGGAAGAGATGTAGATAAGGATAAAATGGTAGAACTTTTGGTTGGTAATGATTCTGGTTTTGAGGATTTATCTGTCTATCCAATTGTGGGATTAGGCGGACTTGGAAAAACAACACTTGCCCAACTCATTTTCAATCATGAAAGGGTGGTCAAACACTTTGAATTGAGAATGTGGGTGTGTGTTTCGGAAGATTTTAGTTTGAAGAGAATGACAAAAGCTATCTTAGAATCTGCATCTGGGCATGCCTATGAGGATTTAGATCTAGATCTGTTGCAGAGAAAACTTGTAGATtttatacaaagaaaaaaatattttcttgtattaGATGATGTGTGGGATGATAAACAAGAAAATTGGCAGAGGTTGAGATCTTTACTGGCTTGTGGTGGAAAGGGTTCTTCAATTTTGGTCACTACTCGTCTTGCAAAGGTAGCAGAAATCATGGGAACAATGCCTCCGCATAATATATCAGAGCTATCCGACGAAGATTGTTGGAAATTATTTAAACAGCGAGCTTTTGCACCAAATGAGGAAGAACAAGCAGAGCTTGTGGTCATAGGGAAAGAGATATTAAAAAAGTGTGGGGGAGTTCCTCTTGCGGCAATAGCATTAGGAAGTCTCTTGCGTtttaaaagagaagaaaaggagTGGCTCTTTGTCAAGGAAAGCAAGTTATGGAAATTACAAGATGAAGATTATGTCATGCCTGCGTTGAAATTAAGTTACTTGAATTTGCCAGTTAAACTGAGACAATGTTTTGCCTTTTGTGCGCTATTTCCCAAAGATGAAAGTATCAGTAAGCAACATGTAATTGAACTTTGGATTGCTAATGGCTTTATTTCATCCAATGAAATGTTGGACGAGGAAGATATTGGCAATGAGGTGTGGAATGAATTATACTGGAGATCGTTTTTCCAAGATATCAAGATGGATAGAATTGACAATTTTACAAGTTTCAAGATGCACGATCTTGTTCACGATCTTGCTCAATCAATTTCGGAAGATGTGTGTTTCATTACAGATAACAATGGCATGCCTAGCATGTCCGAAAGAATCCGCCATCTCTCATGTTATATGTGGGGTTCATTTAGGGAAGTAGATTCACTCCGGTTGCGTAGCGTCAAATCTTTGAAGACCTACACAACGCCAGAGGTTGGTGGTGACAAACATTTACCtcatatattgaaattttattctttacGAGCACTTGAGTTAAGACATATACATGAGTTGTCATCTTCAATCGGTCAATTAAAGCATCTAAGGTACTTGAATCTTTCTTATTGTTACTTTGAAACTCTTCCAAAATCTATATGCAAGTTGTGGAATttgcaaaatttgaaaatagagtATTGTAGTAGTCTCCAAAACTTGCCTAATAATTTTATATGCTTGAAAGCTCTACAACATCTATCTTTGAGTGGCTGCGACTCACTATCAAGCATGCCTCCCCAAATAGGGAAGTTGACTTCCCTGAGGACTTTGAGTATGTATGTAGTTGGCAAGAAAAAAGGATTCCTTTTATCAGAGTTAGGACAATTAAATCTTAAAGGAGAGCTTCACATCAAGCACCTTGAGAGAGTGAAAAGTGTAGAAGATGCTAAAGAAGCCAACATGTTGAGTAAGCACCTGAGCCAGTTGCAGCTGTCGTGGGAGAGAACTGAAGACTCCCAATTGCAAGAAAATGTGGAGAACATTCTTGAAGTGCTTGAACCAGCTCATACCCAAAATCTTCAAGGATTGTCTCTTCAAGGGTATACAGGTGCTCAATTCCCACAATGGATGTCTAGTCCTTCTGTTAAAGATTTACAGTCTTTGTATCTCTTTAATTGTCAAAGCTGTTTACACCTCCCACAGTTGGGGAAACTACCTTCTCTAAAGAAACTAACTATATCCAACATGAGTCGTGTAATATACTTAGATGAGGCATCTCATAATGGTGGAGTTGCGGGAGGTTCCATTGCACTAGAATGTCTGTCATTGGAGAAGCTGCCAAACCTGCTAAGGTTGTCAAGAGATGATAATGAAAATTTGTTCCAGAACCTTTCCGAACTTCGTATAAGCGAATGTCCTAAACTGTCAGGCTTGCCTTGCCTTCCATCTCTCAGTTTTATGCGTATAAAAGGGAAAGGAAACCAAGATTTACTAAGATCATTTCATAAATTTGGTAGTCTCGAATCCCTTGATTTCGTCGATGATAAAGAGCTAACATGTTTTCCAGATGAGATGCTAAGAAACCTCACTTCTCTTAAGAAATTGTTGATTAAGAGATGCTCACAAATAGAAGGTTTGGATAAGGCTTTACAACATGCGACTGCCCTTGAATCGTTATCATTGAGGGATCTTCCAAACCTGGCATCCTTGCCTGACTCGTTAGGAAATCTTTGTTCGCTTCACATACTAGAAATTTCAAATTGTCCGAAGGTAAACGATGCGAAAAGGAAACAGGTGAGGACTGGCATAAAATATCTCGCATTCAAAATATTTCCATTGAAGAAAGTCGTTTTTGAAGACTGGGAGGATACTATATTGTTGCAGGATAATGCACACCTCTGCAAGAACATCTACCGGGCATAG 3078 0.3837 MAEAVLELVLHNLSSLIHKEIGLFLGFEQDFKSLSSLLTTIKATLEDAEEKQFTDRAIKDWLLKLKDAAYVLDDLLDECATKALELEYKGFKGGLTDKVQSSCISSFHPKHVAFRYKIAKKMKNIRERLDEIAEERTKFHLNEIVRERSRVIEWRETTSIITQNQVYGRDVDKDKMVELLVGNDSGFEDLSVYPIVGLGGLGKTTLAQLIFNHERVVKHFELRMWVCVSEDFSLKRMTKAILESASGHAYEDLDLDLLQRKLVDFIQRKKYFLVLDDVWDDKQENWQRLRSLLACGGKGSSILVTTRLAKVAEIMGTMPPHNISELSDEDCWKLFKQRAFAPNEEEQAELVVIGKEILKKCGGVPLAAIALGSLLRFKREEKEWLFVKESKLWKLQDEDYVMPALKLSYLNLPVKLRQCFAFCALFPKDESISKQHVIELWIANGFISSNEMLDEEDIGNEVWNELYWRSFFQDIKMDRIDNFTSFKMHDLVHDLAQSISEDVCFITDNNGMPSMSERIRHLSCYMWGSFREVDSLRLRSVKSLKTYTTPEVGGDKHLPHILKFYSLRALELRHIHELSSSIGQLKHLRYLNLSYCYFETLPKSICKLWNLQNLKIEYCSSLQNLPNNFICLKALQHLSLSGCDSLSSMPPQIGKLTSLRTLSMYVVGKKKGFLLSELGQLNLKGELHIKHLERVKSVEDAKEANMLSKHLSQLQLSWERTEDSQLQENVENILEVLEPAHTQNLQGLSLQGYTGAQFPQWMSSPSVKDLQSLYLFNCQSCLHLPQLGKLPSLKKLTISNMSRVIYLDEASHNGGVAGGSIALECLSLEKLPNLLRLSRDDNENLFQNLSELRISECPKLSGLPCLPSLSFMRIKGKGNQDLLRSFHKFGSLESLDFVDDKELTCFPDEMLRNLTSLKKLLIKRCSQIEGLDKALQHATALESLSLRDLPNLASLPDSLGNLCSLHILEISNCPKVNDAKRKQVRTGIKYLAFKIFPLKKVVFEDWEDTILLQDNAHLCKNIYRA 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01568 1025 Gene3D - 325 407 IPR042197 -
Tsu05g01568 1025 CDD RX-CC_like 2 134 IPR038005 -
Tsu05g01568 1025 PRINTS Disease resistance protein signature 192 207 - -
Tsu05g01568 1025 PRINTS Disease resistance protein signature 630 646 - -
Tsu05g01568 1025 PRINTS Disease resistance protein signature 361 375 - -
Tsu05g01568 1025 PRINTS Disease resistance protein signature 265 279 - -
Tsu05g01568 1025 Gene3D Ribonuclease Inhibitor 505 676 IPR032675 -
Tsu05g01568 1025 Gene3D Ribonuclease Inhibitor 677 869 IPR032675 -
Tsu05g01568 1025 SUPERFAMILY L domain-like 473 978 - -
Tsu05g01568 1025 Gene3D - 149 318 IPR027417 -
Tsu05g01568 1025 Pfam NB-ARC domain 174 409 IPR002182 GO:0043531
Tsu05g01568 1025 PANTHER OS05G0414200 PROTEIN 33 931 - -
Tsu05g01568 1025 Gene3D - 408 499 IPR036388 -
Tsu05g01568 1025 Gene3D - 5 135 - -
Tsu05g01568 1025 Pfam Rx N-terminal domain 5 93 IPR041118 -
Tsu05g01568 1025 Gene3D Ribonuclease Inhibitor 870 998 IPR032675 -
Tsu05g01568 1025 PANTHER DISEASE RESISTANCE PROTEIN RP 33 931 IPR044974 GO:0006952
Tsu05g01568 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01568 Tsu-Chr5 15230060 15234623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01568 189 784 WRKY Transcription Factor Family AT5G45050 22.941 1.62e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01568 - - mtr:MTR_5g035280 1287.71