Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01557 ATGGCTGAGGCTGTGCTTGACCTTGTGCTTCACAATTTGAGCTCACTCATTCATGAGGAGATTGCCATATTTCTAGATTTTGAACAAGACTTCAAAACTCTTGCCAGCTTGCTAACTACAATCAAGGCTACACTTGAAGATGCTGAAGAGAAACAATTCACTAACAGAGCTATCAAGGATTGGTTGCATAAGCTCAAAGGTGCTGCTCATGTCCTCGATGACATCTTGGACGAGTGTGCCACCCAAGCACTGGAGTTGGAGCATGGAGGATTCAAATGTGGACCATCACACAAGGTACAAAGCTCTTGCATATCTTCTTTAAATCCTAACCATGTTGCTTTTCGTTACAAAATTtctaagaaaatgaaaaggataAGGGAGAGATTGGACGAAATAGCTGAAGAAAGGAGTAAGTTTCATTTGATTGAGATAGTTAGAGAGCAGAGAAGCGGAGTCCTTGACTGGCGACAAACCACCTCAATTATTACTCAACCTCAAGTTTTTGGAAGAAATGAAGATAAGGATAAAATTGTAGACTTTTTGGTTGGCGATGCTTATGCTTTTGAGAATTTATCAGTCTATCCGATAGTTGGTCTAGGTGGACTTGGGAAAACAACACTTACCCAACTTATCTTTAATCATGAGAGGGTAGTCAACCATTTTGAGCTAAGAATTTGGGTGTGTGTTTCTGAAGATTTCAGCTTGAAGAAAATGACAAAAGCTATCATAGAATCAGCATCAGGACATGCCTGTGAGGATTTGGATCTAGAGCCATTGCAGAGAAAACTTTTAGATTTGCTAAAAGGAAAAAGGTATTTGCTAGTGTTGGACGATTTATGGGATGATGAACAAGAGAATTGGCAGAGGTTGAAATTTGTATTGGCTTGTGGTGGCAAGGGTGCTTCGGTTTTGGTAACCACTCGTCTTCCAAAGGTAGCAGCAACTATGGGAACTGTGTCTGCTTATTATTTATCAAAGCTATCTGACAATGATTGTTTGAAACTGTTTAAACAACGAGCCTTTGGACCAAATGAGAAACAATGTGCAAACCTTATGGTCATAGGGAATGATATAGTAAAAAAGTGTGTGGGAGTGCCTCTTGCAGCAATAACATTGGGAAGTCTCTTGCGTTTcaaaagagaggaaaaagaGTGGCTCTATGTCAAGGAAAGCAAGCTATGGAGTTTACAAGGTGAGAATTCTGTTATGGCTGCCTTGAGATTAAGTTATTTAAATTTGCCTGTAAAATTGAGACAGTGTTTTGCCTTTTGTGCACTATTTCccaaagataaaataataagcaaACACTTTCTAATAGAATTGTGGATGGCTCATGGATTTATTTCATCAATTGAAAAGTTGGATGAGGAGGATATTGGCAATGAGGTGTGGAATGAACTGTATTGGAGATCATTTTTTCAAGATATTGAGATTGatgaatttggtaaaattaaaagtttcaaaatGCATGATCTTGTTCATGATCTTGCTCAATCTGTTGCAGAAGAAGTATGCTCCATTACGAATGACAATGATGTACCTAGTACATCTGAAAGAATCCGCCACCTCTCAATTTATAGAAGGAAACCCTTAAGGGATGTCAATTCGGTTCGGTTGGCTAATGTGAAATCATTGAAGACGTGTTTAAAGCATGTTGACCAACTTTTACCACATGTATTGAAATGTTATTCTTTACGGGTACTTGACTTTGAAAGAAGAACCAAGTTGTCATCTTCAATTGGTTGTTTAAAATATCTAAGGTATTTGAATCTATCTGATGGTAAGTTCAAAACTCTACCAAAATCCATATGTAACTTGTGGAACTTGCAGATTTTGAAGTTAGACAATTGCTATCATCTTCTTAACTTACCTAATAGTTTGACACAATTGAAAGCTCTACAAAGTATATATTTGACCAACTGCTACTCATTATCAAGCTTGCCCCCCATGATAAGGAAGTTAACTTCCTTGAAAACTTTAACTTTGTATATAGTTGGCAAGAAGAAAGGGTTTCTTTTGGAAGAATTAGGGCACCTAAACCTTAAAGGAGATCTTTATATTAGGCACTTGGAGAGAGTAAAAAGTGTAATGAATGCCAAAGAAGCCAATATGTCGAGTAAGAACTTTAAGCAACTGCGATTGTCATGGGAGAGAAATGAAGAGTCCAATTTACAAGAAAACGTTGAGGAGATTCTTGAAGTGCTTCAACCTCAAATCCAACAACTTCAAACTTTGGGTGTGCAAGGATATACAGGTTCCTATTTCCCACAATGGATGTCTAGTCCTTCTTTGGAAAATTTAACTTTTCTACAAATAATGGATTGCAAAAGTTGTTTACACCTTCCAGTGTTGGGAAAACTACCTAATCTAGTGGATCTAAGAATATTGAACATGAATCATGTAATATACGTAGACGAGGAGCCATGTGATGGTGGAGTTGCAGGAGGTTTCGTTAAATTAGCAGTTCTAGTACTCGTTGAGCTGCCAAACCTGGTAAGGTTATCAAACGACGATAAAGAAAACATGTTTCCATGTCTTTCAAGACTTCAAATTACTGACTGTCCTAAACTTTTAGGCTTGCCTTGCCTTCCGTATCTCAATGATTTGCGTATAGAAGGGAAATGCAACCAAGATTTGGTAAGTTCAATTCATAAACTCAGTAGTCTTGAATCACTTCGATTCAAAGATAATGAAGATCTAACTTGTTTTCCAGATGGGATGCTACGAAACCTCACATCTCTAAAGATATTAGACATTTATGGTCTATTCAAACTTGAGGAACTCCCAACTGAACTCATTTACCTTAATGCTATCCGTGAAATACATATCACTGACTGTGAGAACCTCAAGTCATTGACAGAAGAAGTATTACAAGAGTTGCATTCTCTTGAGATATTGGAAATTGTTAGGTGTCCAAAGTTTGATTCGGAGTCGCTCAGAAATAGAAGGTTTCGATGA 2958 0.3675 MAEAVLDLVLHNLSSLIHEEIAIFLDFEQDFKTLASLLTTIKATLEDAEEKQFTNRAIKDWLHKLKGAAHVLDDILDECATQALELEHGGFKCGPSHKVQSSCISSLNPNHVAFRYKISKKMKRIRERLDEIAEERSKFHLIEIVREQRSGVLDWRQTTSIITQPQVFGRNEDKDKIVDFLVGDAYAFENLSVYPIVGLGGLGKTTLTQLIFNHERVVNHFELRIWVCVSEDFSLKKMTKAIIESASGHACEDLDLEPLQRKLLDLLKGKRYLLVLDDLWDDEQENWQRLKFVLACGGKGASVLVTTRLPKVAATMGTVSAYYLSKLSDNDCLKLFKQRAFGPNEKQCANLMVIGNDIVKKCVGVPLAAITLGSLLRFKREEKEWLYVKESKLWSLQGENSVMAALRLSYLNLPVKLRQCFAFCALFPKDKIISKHFLIELWMAHGFISSIEKLDEEDIGNEVWNELYWRSFFQDIEIDEFGKIKSFKMHDLVHDLAQSVAEEVCSITNDNDVPSTSERIRHLSIYRRKPLRDVNSVRLANVKSLKTCLKHVDQLLPHVLKCYSLRVLDFERRTKLSSSIGCLKYLRYLNLSDGKFKTLPKSICNLWNLQILKLDNCYHLLNLPNSLTQLKALQSIYLTNCYSLSSLPPMIRKLTSLKTLTLYIVGKKKGFLLEELGHLNLKGDLYIRHLERVKSVMNAKEANMSSKNFKQLRLSWERNEESNLQENVEEILEVLQPQIQQLQTLGVQGYTGSYFPQWMSSPSLENLTFLQIMDCKSCLHLPVLGKLPNLVDLRILNMNHVIYVDEEPCDGGVAGGFVKLAVLVLVELPNLVRLSNDDKENMFPCLSRLQITDCPKLLGLPCLPYLNDLRIEGKCNQDLVSSIHKLSSLESLRFKDNEDLTCFPDGMLRNLTSLKILDIYGLFKLEELPTELIYLNAIREIHITDCENLKSLTEEVLQELHSLEILEIVRCPKFDSESLRNRRFR 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01557 985 PRINTS Disease resistance protein signature 909 925 - -
Tsu05g01557 985 PRINTS Disease resistance protein signature 266 280 - -
Tsu05g01557 985 PRINTS Disease resistance protein signature 362 376 - -
Tsu05g01557 985 PRINTS Disease resistance protein signature 193 208 - -
Tsu05g01557 985 CDD RX-CC_like 2 134 IPR038005 -
Tsu05g01557 985 Pfam Rx N-terminal domain 6 92 IPR041118 -
Tsu05g01557 985 PANTHER DISEASE RESISTANCE PROTEIN RP 8 975 IPR044974 GO:0006952
Tsu05g01557 985 PANTHER OS10G0130600 PROTEIN 8 975 - -
Tsu05g01557 985 Gene3D - 326 408 IPR042197 -
Tsu05g01557 985 Gene3D - 6 132 - -
Tsu05g01557 985 Gene3D - 409 500 IPR036388 -
Tsu05g01557 985 Pfam NB-ARC domain 173 410 IPR002182 GO:0043531
Tsu05g01557 985 Gene3D - 153 321 IPR027417 -
Tsu05g01557 985 Gene3D Ribonuclease Inhibitor 862 982 IPR032675 -
Tsu05g01557 985 Gene3D Ribonuclease Inhibitor 671 861 IPR032675 -
Tsu05g01557 985 SUPERFAMILY RNI-like 827 975 - -
Tsu05g01557 985 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 424 IPR027417 -
Tsu05g01557 985 SUPERFAMILY L domain-like 488 868 - -
Tsu05g01557 985 Gene3D Ribonuclease Inhibitor 508 667 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01557 Tsu-Chr5 15111662 15114685 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01557 544 662 WRKY Transcription Factor Family AT4G12020 32.773 7.95e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01557 - - mtr:MTR_5g035280 1391.33