Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01543 ATGAAGGCATTGATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCTATGATTCTGCATCAGATAGAGGCTCTTAAGGACATTGGAGTTACTGAAGTGGTGTTGGCTATCAATTACCAACCAGAGGTGATGCTGAATTTTTTGAAAGATTTTGAGGAAAAGCTCAACATCAAAATCACTTGCTCTCAAGAAACTGAACCATTGGGAACTGCTGGTCCCTTGGCTCTTGCCAGAGATAAGCTGATAGATGGCTCTGGTGAGCCTTTTTTTGTTCTCAACAGTGACGTTATCAGTGAGTATCCACTTAAAGAAATGATAAAATTCCACAAATCCCATGGAGGAGAGGCTTCCATAATGGTGACAAAGGTTGAGAAATTTGTAGAGAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGGATCTACCTATTGAACCCCTCGGTTTTGGATCATATTGAACTGAGACCCACTTCTATTGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGCGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAGGGACTATATCACAGGCCTGAGACTCTACCTGAACTCACTGAGGAAGAAGACTTCTTCTAAGTTGGCCAGTGGCCCTCACATTTTGGGGAATGTGATTGTGCATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTATAATTGAGTCAGGTGTCAGGCTTTCAAGCTGCACTGTGATGCGTGGAGTTCGGATTAAGAAGCATGCTTGCATATCCAACAGCATCATTGGGTGGCATTCGACTGTTGGGCAATGGGCTCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTATGTGATGAAGTTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATCAAAACAAGCATTCTGAATCCAGAGATAGTCATGTGA 1032 0.437 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKDIGVTEVVLAINYQPEVMLNFLKDFEEKLNIKITCSQETEPLGTAGPLALARDKLIDGSGEPFFVLNSDVISEYPLKEMIKFHKSHGGEASIMVTKVEKFVEKPKLFVGNKINAGIYLLNPSVLDHIELRPTSIEKEVFPKIAAAKKLYAMVLPGFWMDIGQPRDYITGLRLYLNSLRKKTSSKLASGPHILGNVIVHETAKIGEGCLIGPDVAIGPGCIIESGVRLSSCTVMRGVRIKKHACISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKTSILNPEIVM 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01543 343 CDD M1P_guanylylT_B_like_N 1 216 IPR045233 GO:0004475|GO:0005525|GO:0009298
Tsu05g01543 343 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 343 - -
Tsu05g01543 343 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 215 IPR029044 -
Tsu05g01543 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 294 IPR029044 -
Tsu05g01543 343 Pfam Nucleotidyl transferase 2 139 IPR005835 GO:0009058|GO:0016779
Tsu05g01543 343 Pfam Bacterial transferase hexapeptide (six repeats) 243 277 IPR001451 -
Tsu05g01543 343 Gene3D Hexapeptide repeat proteins 216 339 - -
Tsu05g01543 343 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE FAMILY PROTEIN-RELATED 1 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01543 Tsu-Chr5 14909844 14912013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01543 1 291 Eukaryotic Initiation Factors Gene Family AT3G02270 23.626 1.79e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01543 K00966 - csin:114292478 632.098