Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu05g01541 | ATGGCAACCACTCAGTCGGCGGAGCACACAGGGTCACAACATTACAACACACAACAGATGGACAACTCCGGTAAATTTTCAGATGTTAATTTCGATGATGATGGAGATAATGAACATTCTGCTTTTGGTGAAGAAAGTGAAATTATGGAGTCTACAGACCGCAATGTATCTGATGATAGCATTGAGAATTCTGATTCCATTGTAATAGATGGTAGGTTTGTTAGGATTAATTCCATGACGGTGGATGATATTGAGGGTCTTCATTTTGGTAGTGAAAATGACGcttataaattttatgtaaAGTATGCAAGAAGCACCGGTTTCGTTGTTAGGAAACATAATGTGACAAGAAATTGTAGTGGAACGATTGTAACGCGGCAGTTTGTGTGCAACAAGCATGGAGAAAGAAACCCAATACACCTGACGAGGGCTGACAGGGTAAGAGATCATAAACCTATCACCCGGATTAATTGTGAGGCCCACCTTCATATACATTATGATGTAGAGAGGTTGAGATGGGTAGTGATTTCTTTTGAAGTGTGTCATAACCATGAGCTAACACCGtctaaatttattcatttatttcctGCCTACCGTGGAATGACGGATGCCGACAAAGCTCAAATTGACAGCCTGCATTCAGATGGTATCCAAACACGTCATATAATGGGTCACATGGTGGCAAACAAGGGTGGATATGATGCTGTTGGTTTtacaaaaaaagatttgtatAACTATTTTGGCAAGAAAACCATTGTAGATATTAAAGATGGTGATGTCGTTGCTTCTTTAAGCTATCTACGGGGGAAAGCGGGTTTAGATCCTATGTTGTATGCCAAATATACCATCGGTGGGGATGGAAAATTGAAGCGTTTGTTTTGGGCTGATGGACGGAGTCGAAATGACTTTTTGTGGTTTGGCGATGTTATTGCGTTTGACGCCACatataagaaaaacaaatacaattttCCTTTGGTAATCTTTTCTGGCTGCAACAACCATTCACAAACGATTATTTTTGGTGCTGCTTTGGTTTCAGATGAAACAACCGAAACATATAAATGGGTTCTTAGCTCATTTTTAGAAGCAATGGGAAATCGGCAACCAAAAGCTGTAATGACTGATGGTGATTTAGCCATGAGAGAGGCTGTAAGAGTTGTTTTTCCTGAAGCATGTCACAGACTGTGTGCGTGGCATTTGAACAAGAATGCTcaagaaaatgttaaaaataaagattttttgACAGATTTCCAGAAAGCAATGTACTCAAATATGACcgttgatgaatttgaagagtTTTGGTCTAATCTTGTTGAGACGAATGGATTACAAGGTAACAATTGGGTGGCGAAAACATATGAGAACAAGAAATTATGGGCAACTGCCTACTTTCAAGATAAGTTTTTTGGTCGCATGCGGACAACTTCTCAATGTGAAGCCATCAATTCAATGATGAAAAGATATGTTAAAAAGAAATGCAGCATTTATGAGTTTATGCATAAATTTGACCAGGTATTAAGAGAATACAAAAACAATGAACATGTTGCTGATTTTAAAAGTTATAGCTCTGAACCAGCGTTGACAACTGGTTTGGATAGCATCGAGAAGGATGCTTCAAAAATTTACACATTAGAGATgtttaaagaagtaaaaaaccAGATTGTCAAGTCCTCGGCATTAATTGTTTCTGAGCGGGAGGAAGTTGAAGACAAGTTGTTGTTTATATTGACCAAAACATGTGATACAAAATATGTAAAAGAGGTTTTTTATGACACTACAAATTCTTCATTTTACTGTGAATGTAGATTGTTTGAGGCTCGCGGAATTCCATGTTCACatattatttttgtcatgaAAGCAGAACATGTTGACCATATCCCAAGcagtttgattttgaaaagatggactaaaaatgcaaaaattccAATAATGGCACCAAATGTTGGAAAAGGATTAGATTCTAATACGACAGAGGTTGACCGTTGTGGTGCATATTCAGCTGCTTGTAATAGGTTGTGCAAAGTTGCTGCTGAAAGTGGGGCGTGCTTTAATGATGTAATGGATGACATTTTAAAGCTTACTGAAAAGTATAGTAACCTAAAATTGAGAGGTAGTGCTAGGACGCAAAATTCAGAAGTGGACAGACATATTGGTGATCCCGATGCTGTTAATTCTAAAGGTGCTCCACCAAAGAGGAAAAGTTGCCCCATGAAGAGGCCTAAACACTGTACAAATTGTAATGACACTAAACACAATGCTAAGACATGTCGTATGCGTATTGATGTAAATGGATCGCAAATGGAAAATGACAAGGATGCTGCCAAATTTAGCAAGGCAACATATAATTCTGATAAAGAAATCTCTAAAAGCGATTTAAACAACATTCATGGTTCTAATGTGAAGGAAAAAAGTAATTCTAATCCGAAGCAGAAAAAGGCAAAAGACATGAATGAAACTAACCATCACATTGGAGGTCTGCCTATGATGTCCCAAGTACAGCCAAATGCTAATTCAAGCCAAgATAAAGAAATGTCTAGAAGCGATTTAAACAACATTCATGGTTCTaatttgaaggaaaaaagtGATTCTGATCCGAAGCAAGAAAAGGCAAAAGACGGGAATGAAACTAACCATCCCATTGGAGGTTTGTCTATGATGTCCCAAGTACAGCCAAATGCACACGAAATGCATTACCCAACACCTCATTTTGCCAATTCAAGCCAAGTACCTCCTCCTACTTTTGCTACAACTGGTCAAACTCCTACCATTGGTAGTCTGCCTATGATGTCCGTTATGCAGCCAAATGCACAACAAATGTATTATCCAATGTCTTATTTTGCCAATTCAAGTCAAGTACCTCCTCCTATTTATGCTATGAATGGTCAAACTCCTCCTAGTGGAGGTCTGCCTATGATGTCCCAACTGCAGCCAAATACACACCAAATGCAACGCCAGGTACCTGCCTCTACTTTTGCTATAGATGGTCAAACTCCTCCTATTTTACAGCAACCACCACAGTACTTTTTTGGAATGCCGGCAACTAGTAATGGGCCATCTTTTTAG | 3063 | 0.3673 | MATTQSAEHTGSQHYNTQQMDNSGKFSDVNFDDDGDNEHSAFGEESEIMESTDRNVSDDSIENSDSIVIDGRFVRINSMTVDDIEGLHFGSENDAYKFYVKYARSTGFVVRKHNVTRNCSGTIVTRQFVCNKHGERNPIHLTRADRVRDHKPITRINCEAHLHIHYDVERLRWVVISFEVCHNHELTPSKFIHLFPAYRGMTDADKAQIDSLHSDGIQTRHIMGHMVANKGGYDAVGFTKKDLYNYFGKKTIVDIKDGDVVASLSYLRGKAGLDPMLYAKYTIGGDGKLKRLFWADGRSRNDFLWFGDVIAFDATYKKNKYNFPLVIFSGCNNHSQTIIFGAALVSDETTETYKWVLSSFLEAMGNRQPKAVMTDGDLAMREAVRVVFPEACHRLCAWHLNKNAQENVKNKDFLTDFQKAMYSNMTVDEFEEFWSNLVETNGLQGNNWVAKTYENKKLWATAYFQDKFFGRMRTTSQCEAINSMMKRYVKKKCSIYEFMHKFDQVLREYKNNEHVADFKSYSSEPALTTGLDSIEKDASKIYTLEMFKEVKNQIVKSSALIVSEREEVEDKLLFILTKTCDTKYVKEVFYDTTNSSFYCECRLFEARGIPCSHIIFVMKAEHVDHIPSSLILKRWTKNAKIPIMAPNVGKGLDSNTTEVDRCGAYSAACNRLCKVAAESGACFNDVMDDILKLTEKYSNLKLRGSARTQNSEVDRHIGDPDAVNSKGAPPKRKSCPMKRPKHCTNCNDTKHNAKTCRMRIDVNGSQMENDKDAAKFSKATYNSDKEISKSDLNNIHGSNVKEKSNSNPKQKKAKDMNETNHHIGGLPMMSQVQPNANSSQDKEMSRSDLNNIHGSNLKEKSDSDPKQEKAKDGNETNHPIGGLSMMSQVQPNAHEMHYPTPHFANSSQVPPPTFATTGQTPTIGSLPMMSVMQPNAQQMYYPMSYFANSSQVPPPIYAMNGQTPPSGGLPMMSQLQPNTHQMQRQVPASTFAIDGQTPPILQQPPQYFFGMPATSNGPSF | 1020 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 824 | 852 | - | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 805 | 819 | - | - | |
Tsu05g01541 | 1020 | Pfam | MULE transposase domain | 309 | 403 | IPR018289 | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 853 | 875 | - | - | |
Tsu05g01541 | 1020 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 56 | 716 | IPR031052 | GO:0006355 | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 1 | 60 | - | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 27 | 60 | - | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 785 | 884 | - | - | |
Tsu05g01541 | 1020 | Pfam | FAR1 DNA-binding domain | 97 | 187 | IPR004330 | - | |
Tsu05g01541 | 1020 | MobiDBLite | consensus disorder prediction | 705 | 740 | - | - | |
Tsu05g01541 | 1020 | ProSiteProfiles | Zinc finger SWIM-type profile. | 584 | 622 | IPR007527 | GO:0008270 | |
Tsu05g01541 | 1020 | SMART | 26again6 | 597 | 624 | IPR006564 | GO:0008270 | |
Tsu05g01541 | 1020 | Pfam | SWIM zinc finger | 598 | 618 | IPR007527 | GO:0008270 | |
Tsu05g01541 | 1020 | PANTHER | PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 | 56 | 716 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu05g01541 | Tsu-Chr5 | 14889366 | 14893673 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Tsu05g01541 | MULE | 4.7e-29 | CL0219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu05g01541 | - | - | ccaj:109792835 | 964.526 |