Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01523 atgGTACGATGGCTAAACATGAACGGTACAAACAAATTATTACCATTTGTAGGAATGATTATAGCTGTTTTAGCACAAAGTGGAAGCATGGTGGTAATTAAAGTTGCAATGAAAGATGGAATGAACAAATATGTAATGGTTGTGTATTCCATGGCACTTTCCACCATCTTGCTTCTTCCCTTAGCCTTTTTTATCAACAGGTCAGAGCGTCCTCCTATAACTTTCTCTGCACTTTGGAGCTTCTTTTTGCTTGCTCTCATGGGAACTTTAGGACAGATAATGACTTATGGTGGCATAGAACTCAGCTCACCTATTCTTGGATCAGCAATGCTTAACCTCATTCCAGCTTTCACTTTCGTACTTGCTCTGCTTTTCAGGATGGAAAGAATATATTGGAGACATTCTAGAAGCCAAGCTAAAGTGATAGGAACTATAGCATCAATGGGTGGAGCATTTGTTGTCATATTTTACAAGGGTCCACCAATCTTCAAGATAAATTCATCAAGTTCTTACAATACACTTCAATTTTCACCAAATTTGAATTGGATTTTGGGAGGGTTGTTATGTGCTGGGGATTCTTTAGTTTCATCCATATGGTACATATATCAGGTTTCAGTAACAAAGAAATACCCTGCTGTAATAGTCATAGTATTCTTCCAAGTATTTTTTATTGCAATTCAATCAGGAGTATTTGCCTTAATCGTGGTTAGAGATCCAAGTGAATGGGAACTAAAGCTTGATATGGGATTGGTTGTCATTTTTTACCAGGCAATAGGTGCAATAGGGATTCGGTACTTACTACAAACATGGTGTGTACAAAGAGCTGGTCCTCTATTTTGTGCTATGTTCAAGCCTGTGGGAATCATCTTCACTGTTTTATTGGGTTCAATTTTTCTAGGAGATGACTTCTGTCTTGGAAgTTTGATTGGTGCGGTTATAATCGTGGTAGGATTTTATGCTGTGCAATGGGGGAAAGCATCAGAAGAGAAAGGAATTCAAAACTTGGACACATCGTGCAATGTTGCTCCACTATTGCAAAACAAAGCATAA 1050 0.379 MVRWLNMNGTNKLLPFVGMIIAVLAQSGSMVVIKVAMKDGMNKYVMVVYSMALSTILLLPLAFFINRSERPPITFSALWSFFLLALMGTLGQIMTYGGIELSSPILGSAMLNLIPAFTFVLALLFRMERIYWRHSRSQAKVIGTIASMGGAFVVIFYKGPPIFKINSSSSYNTLQFSPNLNWILGGLLCAGDSLVSSIWYIYQVSVTKKYPAVIVIVFFQVFFIAIQSGVFALIVVRDPSEWELKLDMGLVVIFYQAIGAIGIRYLLQTWCVQRAGPLFCAMFKPVGIIFTVLLGSIFLGDDFCLGSLIGAVIIVVGFYAVQWGKASEEKGIQNLDTSCNVAPLLQNKA 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01523 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
Tsu05g01523 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Tsu05g01523 349 Pfam EamA-like transporter family 18 155 IPR000620 GO:0016020|GO:0016021
Tsu05g01523 349 Pfam EamA-like transporter family 185 320 IPR000620 GO:0016020|GO:0016021
Tsu05g01523 349 PANTHER WAT1-RELATED PROTEIN 14 336 - -
Tsu05g01523 349 PANTHER WAT1-RELATED PROTEIN 14 336 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01523 Tsu-Chr5 14758643 14769044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01523 10 329 Nodulin-like Gene Family AT5G40240 41.212 2.87e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01523 - - gmx:100816194 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01523 05 14758643 14769044 Tsu05g01523 05 14758643 14769044 ECH
Tsu05g01523 05 14758643 14769044 Tsu04g02660 04 30041810 30044090 ECH