Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01522 ATGGTGAGTGAAGTAGCATCTGTAACAGCAGCAATGGTTACAGTTGAATTCTTGGAAGTAGGTGGTGATACTCTAATGAAATCAGCCACCAAAGATGGAATGAGTATTTATATCTTCGTTTTTTATTCAAACCTTTTtgctctcttttttcttctacCTTCCACTCTCTTCTACCATAGAAATAGAGCTCCTCCTCCAATTTCAGTATCAATTTTCTTCAGAATATTTCTTCTTAGTTGTTTCAGGTATcaacaaactatAGTGCAAATTTTGATGAATACTGGAATTAGATATAGCTCTCCCACGTTGCAATCTGCTATGATTGATCTTTTACCTGCTTTCACCTTCATACTTGCTTTAATTTCAAGgatggaaaaaataaatttgaaacaacATAGCAGTCAGGCAAAAGTAATTGGTACATTGGTCTCCATTGGAGGGGCATTAGTTGTGACATTATATAAAGGGATACCATTGATTAGTAATGCCTTTCAAAATATAGAAGAAATGGGAGCAAGTGGAATTTACTTGACTGGGAAATCTGATTGGATAATTGGTGCTTTTATTCTTGCAATTGCTAGCTTTATCCTTTCTGTTTTACTTATTGTCCAGACTTGGATTGTAAAGGATTATCCAGAAGAGCTAGTGGTAACAACCATTTGTTGCATTTTGGTGGTAATCTTTTCTGCCATTGTAGCTCTCATTGCTGAGGGAATGTCAAATGTTTGGATACTCAGACCCGATAAAGAGTTGGTATCTATGTGTTACTCTGCAATTTTTGTGGTATCAATGAGGAATACCGTAAACACATGGGCATGTCGTCTTAAAGGACCAATATATGTAGCTATGTTCTGCCCTTTAAGAGTGGTCATTGCACTTGGCTTGGGGGTACTATTTTTGGGTGACAATCTTTATCTTGGAAgCATTATTGGAGCTACTATAATAGCTATTGGATTTTATGCTGTGATGTGGGCACAAGTTCAAGATAAACACATCACAAGtgaaaagaattttcaaccaTCTTCTTTGGCCCCTTTATTGCAAAACAAAAGCATAGATCTCTAG 1065 0.3427 MVSEVASVTAAMVTVEFLEVGGDTLMKSATKDGMSIYIFVFYSNLFALFFLLPSTLFYHRNRAPPPISVSIFFRIFLLSCFRYQQTIVQILMNTGIRYSSPTLQSAMIDLLPAFTFILALISRMEKINLKQHSSQAKVIGTLVSIGGALVVTLYKGIPLISNAFQNIEEMGASGIYLTGKSDWIIGAFILAIASFILSVLLIVQTWIVKDYPEELVVTTICCILVVIFSAIVALIAEGMSNVWILRPDKELVSMCYSAIFVVSMRNTVNTWACRLKGPIYVAMFCPLRVVIALGLGVLFLGDNLYLGSIIGATIIAIGFYAVMWAQVQDKHITSEKNFQPSSLAPLLQNKSIDL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01522 354 Pfam EamA-like transporter family 24 152 IPR000620 GO:0016020|GO:0016021
Tsu05g01522 354 PANTHER WAT1-RELATED PROTEIN 15 328 - -
Tsu05g01522 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 155 - -
Tsu05g01522 354 PANTHER WAT1-RELATED PROTEIN 15 328 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01522 Tsu-Chr5 14747294 14753415 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01522 11 353 Nodulin-like Gene Family AT5G40230 42.090 3.94e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01522 - - gmx:100793168 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01522 05 14747294 14753415 Tsu05g01522 05 14747294 14753415 ECH