Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01520 ATGGTGAGTGAAGGAGCAAGTGTAACAGCAGCAATGGTTGCAGCTCAATTCTTGGAAATGGGTGGTAACACACTATTGAAATCAGCCACCAATGATGGAATGAGTATTTTTGTTTACACTTTTTACTCAAATCTTTTTgctctattttttcttctacCATCCACACTTTTCTACCATAGGAAAAGAGCTCCTCCTCCAATTTCAACTTCAATTTTCTTCAGAATGTTACTTCTTAGCTGTATAAGTACTACAGTGCATACTTTGATGTATACTGGAATTGGATATAGCTCTCCCACATTGGCATCTGCTATGACTGACCTTGTCCCTGCTTTTACCTTCATACTTGCAGTAATTTCAAGGATGGAAAATCTAAATCTGAAACAACATAGCAGCCAAGCTAAAAGTATTGGTACAGTGATCTCCATTGCAGGGGCATTAACCGTGACATTATATAAAGGGATACCATTGATTAGTAATGTCAAAGAAATAGGAGCAAGTGAAATTTACCTGACAGGAACATCAGACTGGATAATTGGTGCTTTTCTACTTGCAACTGGTAGCCTAGGCCTTTCTGTTTTATATATTGTCCAgACTTGGGTTATCAGGGAATATCCTGAAGAGTTGGTGGTAACATCTATTAGTTGTGGCTTGGTGGTAATCTTATCTGCAATTGTAGCTCTGATTGTTGAGGGAAATTCAAATATTTGGACACTCAGACCTGATAAGGAGTTAGTAGTTGTGTGCTATTCGGCAATTTTTGTGGTATCAATGAGGAGTGTTGTATACACATGGACATTCCGTAAGAAAGGACCAATATATGTAGCCATGTTCTATCCTTTAGGAATGGTCATTGCACTTGGTATGGGTGTAATATTTTTGGGGGATAGTCTTTATCTTGGAAGCATGATTGGAGCTGCTATAATAGCAATTGGATTTTATGCTGTGATATGGGCTCAAGCTCAAGAGGAACAGGAAACAAGTGAAAATAACATTTCCTCATCTTCTTCAGCCCCTCTGTTGTCAACCAAAAACATGGATATCTAG 1044 0.3774 MVSEGASVTAAMVAAQFLEMGGNTLLKSATNDGMSIFVYTFYSNLFALFFLLPSTLFYHRKRAPPPISTSIFFRMLLLSCISTTVHTLMYTGIGYSSPTLASAMTDLVPAFTFILAVISRMENLNLKQHSSQAKSIGTVISIAGALTVTLYKGIPLISNVKEIGASEIYLTGTSDWIIGAFLLATGSLGLSVLYIVQTWVIREYPEELVVTSISCGLVVILSAIVALIVEGNSNIWTLRPDKELVVVCYSAIFVVSMRSVVYTWTFRKKGPIYVAMFYPLGMVIALGMGVIFLGDSLYLGSMIGAAIIAIGFYAVIWAQAQEEQETSENNISSSSSAPLLSTKNMDI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01520 347 PANTHER WAT1-RELATED PROTEIN 16 322 - -
Tsu05g01520 347 MobiDBLite consensus disorder prediction 327 347 - -
Tsu05g01520 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 320 - -
Tsu05g01520 347 Pfam EamA-like transporter family 14 148 IPR000620 GO:0016020|GO:0016021
Tsu05g01520 347 Pfam EamA-like transporter family 178 316 IPR000620 GO:0016020|GO:0016021
Tsu05g01520 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 152 - -
Tsu05g01520 347 PANTHER WAT1-RELATED PROTEIN 16 322 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01520 Tsu-Chr5 14696160 14699891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01520 11 346 Nodulin-like Gene Family AT5G40230 43.567 9.82e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01520 - - gmx:100793168 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01520 05 14696160 14699891 Tsu05g01520 05 14696160 14699891 ECH
Tsu05g01520 05 14696160 14699891 Tsu06g01918 06 23538752 23546309 ECH