Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01517 atggAAGAACATCTTACTCCATTAGCTGTTACTCATCTTCTTCAACACACTCTAAGAAGTTTATGCATCCATGATAATTCTCAATGGGTTTATGCTGTTTTTTGGAGGATCTTGCCTAGAAACTACCCTCCACCAAAATGGGAAGGACAAGGGGCATATGATAGATCAAGAGGAAACAGAAGGAATTGGATATTAGTTTGGGAAGATGGATTCTGCAATTTTGCAGCATCAGCAGCAGCACCTGAAATAAACTCTGGTGGAAGTGATTGTCCTAACTCATCATCAGTTTATGGTAACTGTGAATTAATTCAACCTTACCAAGGTCTTCAACCTGAACTTTTCTTCAAGATGTCACATGAGATCTATAACTATGGTGAAGGGTTGATTGGAAAAGTAGCTGCAGATCACAGTCACAAATGGATATACAAAGAACCTAATGATCAAGAAATTAACTTCTTATCAGCATGGCATAATTCAGCTGACTCACACCCTAGGACTTGGGAAGCACAGTTTTTGTCTGGTATAAAGACTATAGCCCTCATTGCTGTTAGAGAAGGTGTTGTTCAATTAGGAGCTGTTCACAAgGTGATTGAAGACTTAAGCTATGTGGTTCTACTAAGAAAAAAGTTCAGCTACATAGAAAGCATACCAGGAGTACTTCTACCACACCCTTCATCATCAGCATACCCTTATGGTAATATTCCATCAGAACAATGGCATAATTACCAAGGAAGCTATCCACCACAACAACAAAGTGATCAATTATATGATCATTTCAACAACATACCAATGAAAGTAACACCATCAATGAGTAGTCTTGAAGCATTACTATCAAAGTTACCTTCAGTTGTTCCACCACAACAATCacaatcacaacaacaacatgTTTTAgcatcacaacaacaacaacaacaaagagcATTGGAATTTATGGGAGGAATGCAAAAAGTTGCAAAAGAAGAGTTAGATGAAGAACAACAAGAAGAGGTATATAGACCTGAACAACTTGATGTTGGTGAGAGTAGCACTAGTTCCATGTCAAGATACCAACAACATTTCCATCATGATCATCTTGGGAATGGATCAAACAATAATAATGGATTTTGA 1107 0.3568 MEEHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASAAAPEINSGGSDCPNSSSVYGNCELIQPYQGLQPELFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHNSADSHPRTWEAQFLSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYGNIPSEQWHNYQGSYPPQQQSDQLYDHFNNIPMKVTPSMSSLEALLSKLPSVVPPQQSQSQQQHVLASQQQQQQRALEFMGGMQKVAKEELDEEQQEEVYRPEQLDVGESSTSSMSRYQQHFHHDHLGNGSNNNNGF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01517 368 MobiDBLite consensus disorder prediction 284 304 - -
Tsu05g01517 368 MobiDBLite consensus disorder prediction 318 335 - -
Tsu05g01517 368 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 210 IPR025610 -
Tsu05g01517 368 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 362 - -
Tsu05g01517 368 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 362 - -
Tsu05g01517 368 MobiDBLite consensus disorder prediction 318 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01517 Tsu-Chr5 14643719 14646597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01517 15 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.964 4.70e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01517 - - vun:114173114 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01517 05 14643719 14646597 Tsu05g01517 05 14643719 14646597 ECH