Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01482 ATGGATCTGGAAGGTGGAACTCGTCAAAATTCTTCAAAGAAAGATTCATGGAAAACAATTCTAACACTAGCATATCAAAGTGTTGGAGTTGTTTATGGCGATTTAAGCATTTCACCTTTATATGTATTTAGAAGCACTTTTGGGGAAGGAATTGGACATTCAAATACAAATGAAGAGATTTTTGGTGTTTTGTCTTTAGTATTTTGGTCTGTGACACTTGTTCCTTTGGTTAAATATGTATTCATAGTGTTAAAAGCTGATGATAATGGTGAAGGAGGTACTTTTGCTCTTTACTCTTTGTTGTGTAGACATGCTAAAGTCAATTCTCTTCCTAATTGTCAATTGGCTGATGAAGAACTCTCTGAGTATAAGAAAGATGGTTGtggtagtggtggtggtggcggtGTTTCAAATGATAAAGGTTTTGCCTTTAGGCTTAAGTCTACGCTTGAGAAACGCAAGGTTTTGCAGAAGTTTTTGCTTATTCTTGCTTTGATTGGAACTTGTATGGTTATTGGTGATGGTGTTCTTACACCTGCTCTTTCAGTTTTCTCAGCCATATCTGGATTAGAGCTTTCAATGTCCAAGGAGCATCATGCTTATGTAGAAGTTCCAGCTGCATGCATCATATTGATAGGCTTGTTTGCGCTTCAACATTTTGGCACGCATAGGGTCGGCTTCTTGTTTGCTCCGATAGTTATCGCGTGGCTATTTTGCATCAGTGCCATTggaatatataatatattcttcTGGAACCCTCAGATATACCATGCACTCTGTCCAATTTATGCTTTACGATTTATTCGGAAAACTCAAACTGGAGGTTGGATGGCCCTTGGTGGAGTTTTGCTGTCCATAACAGGATCAGAAGCCATGTTTGCTGATCTCGGGCACTTCTCGCAATTATCAATCCAGATTGCTTTTACTTCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGACAAGCTGCTTATCTATCAAGACATCATGAAGTTGAGCATGCGTATCACTTCGGATTTTATGTATCTGTTCCAGAAAAATTGAGATGGCCTGTTCTTGTATTAGCCGTATTTGCTGCAGTTGTGGGAAGCCAAGCCATAATAACTGGAACGTTCTCTATTATCAAGCAATGTTCGGCATTAAATTGCTTCCCAAGAGTTAAAGTCATTCACACATCATCCAAGATTCATGGACAAATATATATCCCTGAGATCAATTGGCTATTGATGCTCTTGTGTTTGGCTGTTACGATTGGTTTCAGAAACACGCAGCATCTCGGTCACGCCTCAGGTTTGGCAGTTATCACAGTGATGCTGGTCACCACGTGTTTGATGTCTCTGGTTATTGTACTATGCTGGCACCAGAATGTTCTCTTTGCGCTCGCATTTGTTCTCTTCTTCGGCACCCTTGAGTCTCTCTTCTTCTCGGCTTCTCTTACCAAGTTCTTACAAGGAGCATGGGTGCCAATTGCATTGGCATTTGTATTTATGACGGTCATGTATGTTTGGCATTACGGTACACTAAAAAAGTACGAATTCGATGTTCAAAATAAGGTTTCCATCAACTGGCTACTCGGCATTGGTCCAAGCATAGGTATTGTACGAGTGCGTGGGGTCGGACTTATACATACAGACCTAGTATCAGGCATTCCTGTTATCTTCTCCCACTTTGTGACCAACTTGCCAGCCTTCCATCAGATCCTAGTCTTTCTCTGCATCAAACATGTGCCGGTCCCGCATGTCAGACCCGAGGAAAGGTTTCTAGTAGGCCGCGTTGGTCCGCGAAATTTCAGAATCTACCGGTGCATAGTGCGGTATGGTTACCGCGACATCCACAAAGATGATATCGAGTTTGAAAATGACCTTCTATGCAGCATAGCTGAGTTCATTCGCACAGGAAGCTTTGGACTATGTTCAAACGAGGAGCttgaaaaaactgaaaaaatgaCAGTTGTTGGAACATATTCTGCACAAACCATTTTGAGGAGCGACGATAATGTGGATAATAATAATGTTGATAATAATGTCAACTCAGAAGAAACATCGTCCGAGCTTAAGGAGATAAAGTCACCTCAAGTGATTCAACAGAAGAAAAAGGTGAGGTTTTTGGTACCAGAGAGTCCAAAAATAGACTCAGAAGCAAAAGAAGAATTAGAGGAAGTAATGGAAGCAAGAGAAGCTGGAATAGCTTACATTATAGGACATTCATACATGAAGGCTAAACCAGGGTCTAGTACTATAAAGAAAATAGCTATTAATTTTGTGTATGAATTTCTAAGGAGGAATAGTAGAGCACCTTCATTTGTACTTGGTGTACCTCATGCATCATCTTTAGAAGTTGGTATGATGTACCaagtttaa 2364 0.3934 MDLEGGTRQNSSKKDSWKTILTLAYQSVGVVYGDLSISPLYVFRSTFGEGIGHSNTNEEIFGVLSLVFWSVTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHAKVNSLPNCQLADEELSEYKKDGCGSGGGGGVSNDKGFAFRLKSTLEKRKVLQKFLLILALIGTCMVIGDGVLTPALSVFSAISGLELSMSKEHHAYVEVPAACIILIGLFALQHFGTHRVGFLFAPIVIAWLFCISAIGIYNIFFWNPQIYHALCPIYALRFIRKTQTGGWMALGGVLLSITGSEAMFADLGHFSQLSIQIAFTSVVYPSLILAYMGQAAYLSRHHEVEHAYHFGFYVSVPEKLRWPVLVLAVFAAVVGSQAIITGTFSIIKQCSALNCFPRVKVIHTSSKIHGQIYIPEINWLLMLLCLAVTIGFRNTQHLGHASGLAVITVMLVTTCLMSLVIVLCWHQNVLFALAFVLFFGTLESLFFSASLTKFLQGAWVPIALAFVFMTVMYVWHYGTLKKYEFDVQNKVSINWLLGIGPSIGIVRVRGVGLIHTDLVSGIPVIFSHFVTNLPAFHQILVFLCIKHVPVPHVRPEERFLVGRVGPRNFRIYRCIVRYGYRDIHKDDIEFENDLLCSIAEFIRTGSFGLCSNEELEKTEKMTVVGTYSAQTILRSDDNVDNNNVDNNVNSEETSSELKEIKSPQVIQQKKKVRFLVPESPKIDSEAKEELEEVMEAREAGIAYIIGHSYMKAKPGSSTIKKIAINFVYEFLRRNSRAPSFVLGVPHASSLEVGMMYQV 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01482 787 TIGRFAM kup: potassium uptake protein 23 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01482 787 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 787 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01482 787 PANTHER POTASSIUM TRANSPORTER 6 1 787 - -
Tsu05g01482 787 Pfam K+ potassium transporter 25 611 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01482 Tsu-Chr5 14227928 14233150 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01482 1 787 Inorganic Solute Cotransporters AT1G70300 70.849 0.0 1166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01482 K03549 - gmx:100793141 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu05g01482 05 14227928 14233150 Tsu05g01482 05 14227928 14233150 ECH