Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01480 ATGGATAGTGGTGGCATTGAAGAGAGAAGAGTGAGGTTGTTGGAGAGTGCCAACAATGATCatcatgattatgattatgagagtaatgttgttgttgatgctaGGGAAGTTGGATTATCAATGGAGACTCATAATAATTGTTCTAATGATGGTAGAGAGGAAAATGGATCAATCACAAAGAGGTCGATTAAGAAGCTTAAGAGACATGATTCTTTAGATGTTGAATCCATGGAGATTTCTGGAAGTCACCCCCATCACCATTTCAAGGATGCTACCATTTTGGCCACACTTGCATTATCATTTCAAACACTTGGTGTTGTGTATGGTGATTTGGGAACTAGTCCTCTCTATGTTTTTGCTGATGTCTTCACCAAAGTTCCAATTGAATCAGATGTTGATGTCTTGGGTGCATTATCATTAGTAATGTACACAATAGCTCTTCTTCCATTAATCAAATATGTTTTCATTGTCCTCAAAGCAAATGACAATGGAGAAGGAGGAACATTTGCACTATACTCATTGATTTGCAGATATGCAAATGTGAGTATGcttccaaatcatcaacaagcTGATGAACACATCTCTAGTTATAGACTTAAACTTCCCAGTCCTGAGCTGAAAAGGGCCTTAGACATAAAGGAGACTTTGGAAAGAAATTCAGCTTTGAAAACTCTTTTGTTACTTCTGGTTCTATTGGGAACTTCCTTGATTATTGGCGATGGAATTCTAACACCGGCAATGTCAGTGATGTCTGCCATAAGTGGACTGCAGGGTGAAGTAAACTGTATTGATCAAGATAAAGTAGTGACTATTTCAATAATAGTTCTAGTGGCTTTGTTCAGCATACAGAAGTTTGGTACCAGTAAAATGGGATTCATGTTTTCTCCTATACTTGCATTATGGTTCATTACTCTTGGTTCAATTGGAATTTATAATATAGTTATGCATGATATTTCTGTTCTGAGAGCAATTAATCCAgcttatatttattatttctttaagaAGAATGGTAAAAAGGCTTGGTCAGCTCTTGGTGGTTGTGTTCTTTCTGTTACAGGTTCAGAAGCAATGTTTGCTGATCTTGGTCATTTTTCAGTAAGAGCAATACAGATTGCATTCACTTGCATAGTATTTCCTTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTATTTGCTGAAGAACCCTACTTCTTATTCAAATATATTCTATGATTCCGTTCCAGGAAGTCTTTTCTGGCCAGTGTTTGTGATTGCCACACTTGCTGCCATGATTGCTAGCCAAGCAATGATATCGGCTACATTTTCATGCATAAAACAATCTATGGCTTTAGGGTGTTTTCCTAGGCTCAAGATAATTCACACCTCAACAAAGTTCATCGGCCAAATTTACATTCCTGTAATAAACTGGTTTCTGATGCTCATGTGCATAATAATTGTTTCCGCCTTCCGAAGCACTACTGATATTGCAAATGCATATGGCATAGCTGAAGTTGGAGTCATGATGGTTAGCACAACCTTAGTGACACTTGTAATGCTTTTAATTTGgcaaaacaacttatttatGGTAATTTCATTCCTACTTATATTTGGATCAGTGGAATTTATTTACATGTCATCTGTCCTATCAAAAATCTTTCAAGGTGGTTGGATTCCACTTGCTTTTGCTACCATTTTCCTCTCAATAATGTACACATGGAACTATGGAAGTGTCCTAAAGTACAAAAGTGAAGTTAAGGACAAAATTTCATTGGGTTTATTGCATGATCTTGGACCAAATCTTGGAACAGTAAGAGTTCAAGGAATAGGATTGTTATACACTGAACTTGTCCAAGGAATTCCCTCCATTTTTGTGCAGTTTCTTCTAAGCCTTCCAGCTATTCACTCTACTATAATTTTTGTTTGCATTAAATATGTTCCTATCCCTATGGTTCCACAAGAGGAAAGATTCATATTTCGAAGAGTTTGCTCAAAAGAGTATCGTATGTTTCGATGTGTCGCGAGGTATGGTTATAAAGAAGGAAGGAAGGAAGATCATCATGAATTTGAACAACTTCTTATTCAAAGTCTAGAGGACTTCTTGATAATGGAAGCTCAAGAAAGTAATGAACTAATGATTCTTCCATTGATTCGCGGCGAAAATTGTGAAGAAACTAATGGAGATTCTGCATATGAGGAACATAGTCTTGAACATGAGATTTCAGCACTTAGAGAAGCAAAAGCATTTGGATGCACTTATTTGCTTGGACATGGTGATGTGAGAGCAAAGAAAAATTCTTTGTTCTTGAAAAAATTGGTGATAAATTATTTCTATGCATTTCTTAGAAGGAATTGTAGAGCAGGTACTGCTAGCATGAGAGTTCCTCAAACCAAAATCATTCAACTTCGTAGGACTTATATGGTTTAA 2406 0.3545 MDSGGIEERRVRLLESANNDHHDYDYESNVVVDAREVGLSMETHNNCSNDGREENGSITKRSIKKLKRHDSLDVESMEISGSHPHHHFKDATILATLALSFQTLGVVYGDLGTSPLYVFADVFTKVPIESDVDVLGALSLVMYTIALLPLIKYVFIVLKANDNGEGGTFALYSLICRYANVSMLPNHQQADEHISSYRLKLPSPELKRALDIKETLERNSALKTLLLLLVLLGTSLIIGDGILTPAMSVMSAISGLQGEVNCIDQDKVVTISIIVLVALFSIQKFGTSKMGFMFSPILALWFITLGSIGIYNIVMHDISVLRAINPAYIYYFFKKNGKKAWSALGGCVLSVTGSEAMFADLGHFSVRAIQIAFTCIVFPCLLLAYMGQAAYLLKNPTSYSNIFYDSVPGSLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRLKIIHTSTKFIGQIYIPVINWFLMLMCIIIVSAFRSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQNNLFMVISFLLIFGSVEFIYMSSVLSKIFQGGWIPLAFATIFLSIMYTWNYGSVLKYKSEVKDKISLGLLHDLGPNLGTVRVQGIGLLYTELVQGIPSIFVQFLLSLPAIHSTIIFVCIKYVPIPMVPQEERFIFRRVCSKEYRMFRCVARYGYKEGRKEDHHEFEQLLIQSLEDFLIMEAQESNELMILPLIRGENCEETNGDSAYEEHSLEHEISALREAKAFGCTYLLGHGDVRAKKNSLFLKKLVINYFYAFLRRNCRAGTASMRVPQTKIIQLRRTYMV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01480 801 TIGRFAM kup: potassium uptake protein 99 799 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01480 801 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 724 801 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01480 801 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 47 701 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01480 801 Pfam K+ potassium transporter 101 673 IPR003855 GO:0015079|GO:0016020|GO:0071805
Tsu05g01480 801 PANTHER POTASSIUM TRANSPORTER 12-RELATED 724 801 - -
Tsu05g01480 801 PANTHER POTASSIUM TRANSPORTER 12-RELATED 47 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01480 Tsu-Chr5 14170057 14177621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01480 56 801 Inorganic Solute Cotransporters AT1G60160 69.782 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01480 K03549 - gmx:100814419 1104.35