Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01452 ATGAGGAACAAAAAATGTGAAATAACTCAACAGACATTTGTCTGCTATAGACAAGGGGTTAGAGATGACAAAGTCAACACTTCAACTGGACGAAAAAGAGTACCCAAAGCATGTGTCCGATGTGGTTGTGAAGCAAAATGTCGTGTTCATATTGAATCAAACACTAAACGGTGGTACATGAAATTACTCCATGATGCACACAACCATCCTTTGTTAGATGACCAATATATTGGAATGCTACCTGCACATAGGAAGATGACAGATCACAACATATGGCGCATGAGGAACATGAGACAAGTTGGTATGAAGACAACCCATATTTTTGGATTATTTGCTACAGAAGCTGGTGGTTATGAAAAAGTTGGTATTCGTAGGCAAGACATGTACAACGAACAGGAAAGACAAGGTTTAACTTCGTCAACAGACGCGAAAGCTGCTTGTGAATATTTAGAAAGTATGCAGACAAGTGATAAAACAATGTTTTGGAGGCATAAAGTTGATCATAATGGAAGACTGACACACTTGTTTTGGTGTGATGGAGGGGCTCAGAGGGATTATTCTATTTTTGGGGATGTTGTGACATTTGATGCTACCTACAAGAGGAACAAATACATGTGCCCGTTAGTTGTATTTTCTGGAGTAAACCATCATAACCAAAGTATTGTTTTTTGTGCTGCTATTGTATTTGACGAAACAGAAGAAACATATGTATGA 714 0.3824 MRNKKCEITQQTFVCYRQGVRDDKVNTSTGRKRVPKACVRCGCEAKCRVHIESNTKRWYMKLLHDAHNHPLLDDQYIGMLPAHRKMTDHNIWRMRNMRQVGMKTTHIFGLFATEAGGYEKVGIRRQDMYNEQERQGLTSSTDAKAACEYLESMQTSDKTMFWRHKVDHNGRLTHLFWCDGGAQRDYSIFGDVVTFDATYKRNKYMCPLVVFSGVNHHNQSIVFCAAIVFDETEETYV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01452 237 Pfam MULE transposase domain 192 236 IPR018289 -
Tsu05g01452 237 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 236 IPR031052 GO:0006355
Tsu05g01452 237 Pfam FAR1 DNA-binding domain 4 72 IPR004330 -
Tsu05g01452 237 PANTHER OS02G0262500 PROTEIN 22 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01452 Tsu-Chr5 13816944 13817657 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu05g01452 FAR1 1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01452 - - ccaj:109791994 249.21