Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01432 atgaaaatggcaAGGATCATACTTGTGacccttttgtttttcaacTTGGTCATTGTTCCTTCAATAGCTCTTCCACCTGGATATGGTAAACCAAATGAAGAAAATACTAATAatgataacaataataataataataataataataataataataataataacaacaacttCTTTGGTAATATACCAAATAACGAAgttgttaataataatattgctGATCTTAAGGCAGGATTCTATAGCGGAAGTTGCCCCAATGCGGAGAAAATTGTTGCGGATGCTCTTGCTGAGATTGTTAAAACGAATCCAAATGCGGTTGCTAGCCTCCTTCGTCTTCAATTTCATGACTGCTTCGTTATTGGATGTGATGCATCAGTCTTGCTAGACTACTCACCGACGGGAGAACAAGTAGAAAAAAGTTCATTTTTCAATGGTCAACTTCTCAAAGGAGCTGATATAGTTGATGATATAAAATCAAAACTAGAAGAACATTGTCCTGGAGTAGTATCATGCTCAGACACATTAGCATTCGCAATCAACGAAGGAATGGCCCTTGCAGGTTTACCTCGTAGAACGCCTCTTGGTGGTCGTAGAGATTCCGTCTATTCCCTCGCATCCGTCGTGGAAGCCAGCAACCTTCCAATGCCCGGTTGGCCAATCGAAAGAATGGTTGAGCTTTTTACTAGAAAAGGTTTCACAATTGAAGAAATGGTTATTTTAATTGGTGCACATTCAGTTGGTTCAGTTCATTGTGATATTTTTATGGAAAGAATTTACAATTTCGCAAATACAAGAAAACCTGACCCGACATTACCGGCTCCAGTGATTACCGAGTTCCAACAACTATGTCAGAATGCTGGGACACCTCAATTTAGAAACCCACCGGTGAATTTCGATGAAACACCAACCGTGCTTGATAACTTGTATTTCAAGAATATGGTGTTTAGAAACAAGACAACTATGCTTACAGATTCTCATTTGATTAATGATCCTAGAACAATTCCTATTGTTCAACGGATGGCCAATGAGGAGGGTTTGTGGCAACAGAAGTTTCCTGAGGTTATGGATAAAATGAGTGCTATGAATGTTCTTACTGGAAATAATGGTGAAGTGAGGAAGACTTGTAGATCcactaattaa 1137 0.3597 MKMARIILVTLLFFNLVIVPSIALPPGYGKPNEENTNNDNNNNNNNNNNNNNNNNNFFGNIPNNEVVNNNIADLKAGFYSGSCPNAEKIVADALAEIVKTNPNAVASLLRLQFHDCFVIGCDASVLLDYSPTGEQVEKSSFFNGQLLKGADIVDDIKSKLEEHCPGVVSCSDTLAFAINEGMALAGLPRRTPLGGRRDSVYSLASVVEASNLPMPGWPIERMVELFTRKGFTIEEMVILIGAHSVGSVHCDIFMERIYNFANTRKPDPTLPAPVITEFQQLCQNAGTPQFRNPPVNFDETPTVLDNLYFKNMVFRNKTTMLTDSHLINDPRTIPIVQRMANEEGLWQQKFPEVMDKMSAMNVLTGNNGEVRKTCRSTN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01432 378 PANTHER PEROXIDASE 25-RELATED 50 376 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Tsu05g01432 378 ProSitePatterns Peroxidases active site signature. 105 116 IPR019794 GO:0004601
Tsu05g01432 378 PANTHER PEROXIDASE 50 376 - -
Tsu05g01432 378 CDD secretory_peroxidase 74 377 IPR033905 GO:0004601|GO:0042744
Tsu05g01432 378 Gene3D - 78 378 - -
Tsu05g01432 378 MobiDBLite consensus disorder prediction 31 59 - -
Tsu05g01432 378 Pfam Peroxidase 91 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 SUPERFAMILY Heme-dependent peroxidases 74 378 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 234 246 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 148 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 107 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 83 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 167 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 295 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 186 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Plant peroxidase signature 352 365 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 ProSiteProfiles Plant heme peroxidase family profile. 73 378 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 MobiDBLite consensus disorder prediction 30 59 - -
Tsu05g01432 378 Gene3D Peroxidase, domain 2 213 357 - -
Tsu05g01432 378 PRINTS Haem peroxidase superfamily signature 297 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Haem peroxidase superfamily signature 105 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu05g01432 378 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01432 Tsu-Chr5 13557769 13559250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01432 72 378 Peroxidase AT5G06720 41.026 1.33e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01432 K00430 - gmx:100802856 421.009