Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01426 ATGGAGGATGAAGGGGATATCGCCACTGCTTTTAATTTAGCCTGGCTTTTGTCAAACATACCGATTTCTAGAGGAGGACCAACAAGTTTGCTCACATTTGACATTCATGCTTTGTACAAATGGTGGCTGGAAAAAGTAGCTGACATAAGCTTACAACAAAGCGCTGCATATGGATTTTGGAATTTTAGCTTCAACACTCTTTATCATTCAACTCAGGTTATTGCCGTGCTATTTGGAGGAATTTCTATTCTTGCGGGAATGAAGTTGCAAAGTTTAATGGGGCATTTGGAGTTTGTAAATGTATCTTTTCACTATCCTTCAAGGCCAACGGTATCTGTAGTTCAACATGTAAACTTTGTTGTCAATCCTGGCGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGAAAAAGCACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCTGGGTGTTCTTCGATCCGTTAGAAGTGATTCTTCATCAAGGAGAAGTGTCATAGTCATTGCATTCAGGCTCTCTACCATACAAGCCGCGGACAGGATTATTGTGATGGATAGGGGTCAAATTGTTGAGGTTGCAGAGAGGATTGTATATGGGATAGTAGATTTGATTATAGAGCTCCTTCAGTCTGATGTGGATACAAGGAGGATAATAGTTGAGGTTGCAGAGTATAAATTATCTTTGGGATTTTAG 708 0.4096 MEDEGDIATAFNLAWLLSNIPISRGGPTSLLTFDIHALYKWWLEKVADISLQQSAAYGFWNFSFNTLYHSTQVIAVLFGGISILAGMKLQSLMGHLEFVNVSFHYPSRPTVSVVQHVNFVVNPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGLGVLRSVRSDSSSRRSVIVIAFRLSTIQAADRIIVMDRGQIVEVAERIVYGIVDLIIELLQSDVDTRRIIVEVAEYKLSLGF 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01426 235 Pfam ABC transporter 115 161 IPR003439 GO:0005524
Tsu05g01426 235 Gene3D - 164 197 IPR027417 -
Tsu05g01426 235 Gene3D - 94 153 IPR027417 -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 155 199 - -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 39 86 - -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 86 154 - -
Tsu05g01426 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 197 IPR027417 -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY 155 199 - -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY 39 86 - -
Tsu05g01426 235 PANTHER ABC TRANSPORTER B FAMILY 86 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01426 Tsu-Chr5 13490957 13495076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01426 85 153 Calmodulin-binding Proteins AT2G36910 47.826 4.69e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01426 - - gmx:100813359 160.614