Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01402 ATGAGCCAAGTATCTGTAGTTCAACATGTAAACTTTGTTGTCAATCCTGGCGAGGTGGTTGCCATTGTTGGTCTTAGTGGTAGCGGAAAAAGTACATTGGTGAATCTTTTGCTCCGTCTCTATGAGCCTACAAGTGGTCTGATTTTGGTAGATGGTGTCCCTCACAAAGACTTGATGTCATGTGGTGGAGAGAGAGAATCGGATATGTGGGACAGGAACCGAAGCTATTCTGGATGGATATTCGCTTGA 249 0.4458 MSQVSVVQHVNFVVNPGEVVAIVGLSGSGKSTLVNLLLRLYEPTSGLILVDGVPHKDLMSCGGERESDMWDRNRSYSGWIFA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01402 82 Pfam ABC transporter 8 65 IPR003439 GO:0005524
Tsu05g01402 82 PANTHER ABC TRANSPORTER B FAMILY 3 58 - -
Tsu05g01402 82 Gene3D - 3 58 IPR027417 -
Tsu05g01402 82 PANTHER ABC TRANSPORTER B FAMILY MEMBER 26, CHLOROPLASTIC 3 58 - -
Tsu05g01402 82 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 58 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01402 Tsu-Chr5 13229579 13234376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01402 4 58 Calmodulin-binding Proteins AT2G36910 45.455 1.19e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01402 - - gmx:100813359 91.6633