Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01388 ATGCAAAGTTGTGTTGGTTCTTCACCTCTACCATTGCCGCCAGTTGGTATAAATCAGACTCAAGTGCCTCTTAAGCATTCCAGACCGAACATTGTTAGGATGCAACGCTTACCATATAACATCAAAAAAGGAGAACTTCAAACTGCAACTTTCGGAAGTTCGTCATCTCGATTCAAATATGCTGCTGCTTTGAGTGCTACATGCGCTGCTTCTGGTGCAACCCAGACTGTAACCCGCAACGCTCGGACAATTACAGTTACTCCTGAGAAAGTGAGGAGCCCTAGACTTGATGACAATGGGCCTGGATTACCACCTCGTGATGATGATGGCAACGGTGGTAATGGAGGAGGAGGCGGCGGTAATTTTGCAGGTGGACTACTCCTTTTGGGTATTCTTGGTCTCCTAGACATGCTTAAAGACATAGAGGGTGAAATTCAAAAGAAAGTCAAAGATTGGAAATTTCATCAAGCTTGA 474 0.4494 MQSCVGSSPLPLPPVGINQTQVPLKHSRPNIVRMQRLPYNIKKGELQTATFGSSSSRFKYAAALSATCAASGATQTVTRNARTITVTPEKVRSPRLDDNGPGLPPRDDDGNGGNGGGGGGNFAGGLLLLGILGLLDMLKDIEGEIQKKVKDWKFHQA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01388 157 MobiDBLite consensus disorder prediction 88 117 - -
Tsu05g01388 157 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 1 148 IPR040299 -
Tsu05g01388 157 PANTHER - 1 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01388 Tsu-Chr5 12960830 12963443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01388 62 144 C2H2 Transcription Factor Family AT1G56200 56.471 9.96e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01388 - K02504 gmx:100781669 90.8929