Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01337 ATGCTGTCCTTTAATGTGCGAGGGTTAGGGTCCTTTGAGAAGAGGCGGGAGGTGCGTAGATTGGTAACTGAAATTAATGTGGATTTCTTATGTATACAGGAAAGTAAGGTGGGGGTGGTGGAGGAAAACTTTATGCGGTCTCTATGGGGTTTAGGTGCGATGAACTATTCTTTTATTCCGTCGGTGGGAGCGTCAGGAGGCATCATCACGGCCTGGAATCCTTCTATTGTTAATGTCTGGTCTTCTAGTACAAAAGAGAATTGTCTGATTGTTCAAGGTAGATTTATTTCTTCCGGTATCGCTTTCAGCCTAGTCAATGTCTATGCTCCATGCAATTCAGAAACACAACTCGGAGTCGCTCGGAACTCAACTTCGCCGGAAAACGCAGGCGGAGTTGGTCGTCGACAGCCACCAACAGTGAGAAATTCCGTCCAGGTTGTCACCAAAATGCCGGATGTTCACATACTTGTTAATGAATTTGTGAATCAGCTTAAAAAACGTAAAATTGAAGGTTCTCAGGCCACAGCAAAGCAGACAGCAGAGTTGCTTCGGTCTGTGATTTCACAGCAAAGGGTGCCTCAAACAAACCAGGCTACAGCTCTGATTAATGCAGTAAGGGCTGTGGGGGAGAAGCTTATCGCTGCTAACCCTGTCGAGCTTGCTGTGGGAAATATTGCAAGGCGTGTTTTGCACATTATAAGGGAGGAGGATCTTTCCCTTGCCACAGCTGCTATAGCTGGTTTGGAGCTATCAGCTGtaagtgatgatgaagatgatgcgGAGCGAGATGATTATCCTGTTTTATCTGCTGCCGCTGTTGCAGCTAATGCAAGAAACACCTTGCGCCCACCATCATTGCAAACTCTTCTAGAGGATGCACCTATTACAGCCGCCATTCCACACACATCTTCTTCAGGGGGTGATTCTGAAGGGAAAAGTAGATcTGTTGATAAGGGCTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTAATTCAAGACATATCTACTTGCTATGAACAAATAGCTGAACAAGCAGTAGAGCACATTCATCAAAATGAGGTAATATTAACGCTAGGTAGTTCAAAGACAGTTTTGGAATTTCTTTGTGCTGCAAAGGAGAaaaagagatcatttaaggtcTTTGTTGCAGAAGGTGCCCCAAGATATCAAGGACACCTCCTTGCAAAAGAATTGGCTGCTAGAGGCTTACAGACCACAGTGATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTGAACATGGTTATCGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTCATTGCCCCAGTTGGATTAAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGAAGTCACAAGTTGTGCCCTCTGTATCCGCACAATCCTGAAGTCCTATTGAATGAGCTGAGGTCCCCGTCTGAGCTACTTGACTTTGGGGAGTTCTCAGATTGCATGGATTCTGCAAGTGGTGGAGGTTCTCTTCACGTCGTTAACCCAACATTCGATTATGTGCCACCAAAACTTGTTAGTCTCTTTATTACTGACACAGGAGGGCATAACCCATCATACATGTACCGGCTCATTGCTGACTACTACTCAGCTGATGATTTGGTGGTGAAACGAAGACCTGCTATTGGAAGTTGA 1695 0.4413 MLSFNVRGLGSFEKRREVRRLVTEINVDFLCIQESKVGVVEENFMRSLWGLGAMNYSFIPSVGASGGIITAWNPSIVNVWSSSTKENCLIVQGRFISSGIAFSLVNVYAPCNSETQLGVARNSTSPENAGGVGRRQPPTVRNSVQVVTKMPDVHILVNEFVNQLKKRKIEGSQATAKQTAELLRSVISQQRVPQTNQATALINAVRAVGEKLIAANPVELAVGNIARRVLHIIREEDLSLATAAIAGLELSAVSDDEDDAERDDYPVLSAAAVAANARNTLRPPSLQTLLEDAPITAAIPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKEKKRSFKVFVAEGAPRYQGHLLAKELAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGGGSLHVVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKRRPAIGS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01337 564 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 152 556 - -
Tsu05g01337 564 MobiDBLite consensus disorder prediction 119 138 - -
Tsu05g01337 564 MobiDBLite consensus disorder prediction 298 322 - -
Tsu05g01337 564 Pfam Initiation factor 2 subunit family 168 538 IPR000649 GO:0044237
Tsu05g01337 564 Gene3D Endonuclease/exonuclease/phosphatase 1 170 IPR036691 -
Tsu05g01337 564 SUPERFAMILY DNase I-like 2 114 IPR036691 -
Tsu05g01337 564 PANTHER BNAA01G32370D PROTEIN 152 556 - -
Tsu05g01337 564 SUPERFAMILY NagB/RpiA/CoA transferase-like 153 553 IPR037171 -
Tsu05g01337 564 Gene3D - 343 548 IPR042529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01337 Tsu-Chr5 12182742 12199966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01337 150 556 Eukaryotic Initiation Factors Gene Family AT3G07300 81.418 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01337 K03754 - gmx:100778545 730.324