Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01330 ATGGATCCGATTCAATTCAACGATTTTCAAAATGACccacaaaccctaatttcagaTCACCACGATTCAGTTATGGAAGATTCCAACGACTCCGTTTTCGATTCAATCCTCTGTGATTCCACTTCCAAACTCATTCCAACTGGATTCACTGCCAGAAATGAAAACGCAGAGGAGTGTGTCATGTTTGTAAATGCGGGAGGGGAAGAGTTTAATGAAGCAGCTGGTGGAGTTAAGTTTCTGGGTGACACTTTTTTTGACGGTGGTAATGTTTTCCGCACAAATGAGCCGATAGTGGAAGGTGGAGATTACCCGTCTATATATCAATCAGCTCGGGTGGGAAGGTTTTGTTATAGAATTGATAACCTTTCTCCTGGGGACTATTTTGTTGACCTTCATTTTGTGGAGATTATTAATGTAAATGGGCCAAAAGGAATGAGGGTGTTCAACGTATACATACAAGAAGAAAAGGTTCTATCTGAATTGGATATCTATGCAGTTGTTGGAGTCAACAAGCCACTACAGATGATTGATTATAGGGTCACTGTGAAGGATGATGGGGTTTTAGTCATAAGATTTGAAAGTATTAATGGAAGCCCTGTTGTTAGTGGGATTTGCATTAGGAGAGCGACGGCAGTTTCACCAGTGACAAGTGATTTCATTAAATGTAACTACTGTGCTGAGCTGATTGAAATTCCTTCATCACAGATGAAAGTTATGCAGACAAAATCTACAGCAAAGTATGAGAATAAGATAAAGGAGCTCACTGTGCAGTGCGAGCTTAAGGCAAAAGAATGCTATGAGGCATGGACGTCATTAACTGAAACAAGTAGGAAAATGGAAAAGGTCCAGATGGAGCTTGATCAAGTGACATTTAAGTCACTCACTACTGAACAAACTGTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTCTAACAGGTATGAACTTGATAAGAAGAAATGGGCAGAAGCAATTACTAGTTTACAGGAAAAAGTAAAGGTCATGAAGAGTGAACAATCTCAGCTTTCCCTTGAAGCACATGAGTGTGTCGATTCAATCCCTGAATTGAATAAGATGGTTTTTGCCGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATATTATGAAGAGATGACCCAGAGAAAGAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTTGTGGATTTCGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACCAAAAAAACATTTAGATTTGACAGGGTTTATACACCAAAAGATGGTCAAGcTGATGTTTTTGCTGATGCATCACCGATGGTAATATCTGTGTTGGATGGCTACAACGTTTGCATATTTGCTTACGGACAAACAGGAACAGGAAAGACATTTACCATGGAAGGAACCGAGCAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAGAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATAAGAGACTTATTGGCTACTGGACCAACATCAAAAAGGTTGGAGATAAAACAAACCTCTGAAGGATATCATCACGTCCCTGGTGTTGTAGAAGCCAAGGTTGACAACATATGTGATGTGTGGAACGTACTGCAGACTGGAAGCAATGCTAGAGCAGTTGGAAGTAATAATGTTAATGAGCACAGCAGTCGATCTCATTGTATGCTGTGTATAATGGTAAAGGCTAAAAATTTGATGAATGGCGAGTGTACCAAGAGCAAGCTCTGGCTTGTAGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGTGCAAGGGGAGCGACTTAAGGAAGCACAAAATATCAATCGATCTCTTTCTGCTCTTGGAGATGTGATATCCTCTTTAGCAGCCAAAAGTAGTCACATTCCGTATAGGAACTCTAAATTGACACATTTACTCCAAGACTCACTTGGAGGTGACTCAAAAACTTTGATGTTTGTACAAATAAGTCCATCAGACCAGGATGTAGGTGAGACTTTGAGCTCACTTAATTTTGCAACTAGAGTGAGGGGCGTTGAGTTAGGTCCTGTAAGGAAGCAAATTGATACAAGTGAACTTCAAAAGACAAAAGCAATGCTTGACAAAGCACGGAGTGAGTGCAGAAGTAAAGATGAATCTATGAAAAAACTAGAAGAAAGTTTGCAAAACATTGAGAGTAAGGCCAAAGGAAAGGATCATGTCCACAAAAATCTACAAGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGCTTAAAACATCCATGCAAAATCAATCAGAGAAACAAATTTCTCAATTATGTGAAAAGTTGAAGGGAAAAGAAGAAACCTGTTGTACTCTCCAACAAAAGGTCAAAGAGCTCGAGAAAAGAATAAAAGAGCAGCTGCAGTCGGAGACTGCAAATTTCCAACAGAAGGTTTGGGATctagagaaaaaattgaaagatcAGTTGCAAGGGTCTGAGTCTGAGTCTTcctttttaaaagataagATCAAGGAGCTTGAGAGAAAACTGAAAGAGCAGGAGCAGAACTCAGAAAGCTTGCTTAAACAACAGATGAAGGAACTAGAGGAGAAATACAAAGAGCGAGAGCAACAGTGGAAGCAAACTCATTGTTATGTTGAAGCCGTAAAGATGGCTGCCACACCAGACATAGCTAAAAACCGCACAAGTGATGAATGTCCAAACGAGATTGAGACTCTCATTTTATGTAGTTCAAACTCAGTAAACCGCCAAATAAGTCAAGACTCTGTTTTGATAAAAGGGAATGATTCTACTCATCAGATGAGAAACAAAAGGCAGCTCAGAAGCAACGAAAATGAGAACCATTTTGTCCTGCCATCGTCCGCTTTACGCGATAGAAAAATCACAAGGAAATCTGATCCACCACCTAAAATTGTAAGAACCGGTAAGATAACTACAAAACCGACTGCCGTTGCTAGTCAAGCTCCTGTGTCTCATAAGAGAGCTAGCACAAGCAGAGATCAAGCTCAAGGAGTTAAAGAGAGGGACAGTAAGAAGAAAGTATGGTCAAGATAG 3159 0.3957 MDPIQFNDFQNDPQTLISDHHDSVMEDSNDSVFDSILCDSTSKLIPTGFTARNENAEECVMFVNAGGEEFNEAAGGVKFLGDTFFDGGNVFRTNEPIVEGGDYPSIYQSARVGRFCYRIDNLSPGDYFVDLHFVEIINVNGPKGMRVFNVYIQEEKVLSELDIYAVVGVNKPLQMIDYRVTVKDDGVLVIRFESINGSPVVSGICIRRATAVSPVTSDFIKCNYCAELIEIPSSQMKVMQTKSTAKYENKIKELTVQCELKAKECYEAWTSLTETSRKMEKVQMELDQVTFKSLTTEQTVEKQAENLRSISNRYELDKKKWAEAITSLQEKVKVMKSEQSQLSLEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKTFRFDRVYTPKDGQADVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFRVSKERSETFSYDISVSVLEVYNEQIRDLLATGPTSKRLEIKQTSEGYHHVPGVVEAKVDNICDVWNVLQTGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNLMNGECTKSKLWLVDLAGSERLAKTDVQGERLKEAQNINRSLSALGDVISSLAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVGETLSSLNFATRVRGVELGPVRKQIDTSELQKTKAMLDKARSECRSKDESMKKLEESLQNIESKAKGKDHVHKNLQEKIKELEGQIELKTSMQNQSEKQISQLCEKLKGKEETCCTLQQKVKELEKRIKEQLQSETANFQQKVWDLEKKLKDQLQGSESESSFLKDKIKELERKLKEQEQNSESLLKQQMKELEEKYKEREQQWKQTHCYVEAVKMAATPDIAKNRTSDECPNEIETLILCSSNSVNRQISQDSVLIKGNDSTHQMRNKRQLRSNENENHFVLPSSALRDRKITRKSDPPPKIVRTGKITTKPTAVASQAPVSHKRASTSRDQAQGVKERDSKKKVWSR 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01330 1052 MobiDBLite consensus disorder prediction 1014 1033 - -
Tsu05g01330 1052 MobiDBLite consensus disorder prediction 957 1052 - -
Tsu05g01330 1052 SMART kinesin_4 395 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 CDD KISc_C_terminal 395 721 - -
Tsu05g01330 1052 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 1038 - -
Tsu05g01330 1052 Coils Coil 318 338 - -
Tsu05g01330 1052 Coils Coil 857 910 - -
Tsu05g01330 1052 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 1038 - -
Tsu05g01330 1052 Coils Coil 740 795 - -
Tsu05g01330 1052 MobiDBLite consensus disorder prediction 1034 1052 - -
Tsu05g01330 1052 Pfam Kinesin motor domain 403 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 Gene3D Kinesin motor domain 343 721 IPR036961 -
Tsu05g01330 1052 Coils Coil 832 852 - -
Tsu05g01330 1052 Pfam Malectin domain 61 204 IPR021720 -
Tsu05g01330 1052 ProSiteProfiles Kinesin motor domain profile. 397 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 719 IPR027417 -
Tsu05g01330 1052 ProSitePatterns Kinesin motor domain signature. 619 630 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tsu05g01330 1052 Gene3D - 55 211 - -
Tsu05g01330 1052 PRINTS Kinesin heavy chain signature 620 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 PRINTS Kinesin heavy chain signature 471 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 PRINTS Kinesin heavy chain signature 589 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu05g01330 1052 PRINTS Kinesin heavy chain signature 669 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01330 Tsu-Chr5 12115030 12120864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01330 313 772 Calmodulin-binding Proteins AT5G65930 38.115 6.14e-86 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01330 K10406 - gmx:100800016 1659.81