Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01321 ATGGACGTAAACCACTCATTCCAGACGGAGAATGTCATTCTTCCAACTTGGCTTGGAGTTGGTCCAATATGTGGTTCATGTGGTACATGTTCAAATTGCTCCAAGGGTTGGGAGAGTTACTGCCCCAAAACAATTGCAACATATAACTCACTTGACTATGATGGATCAACAACCTATGGAGGatactcaaataaaatagtggttAATGAAAATTATGCTATTATAATTCCAAAAGGGTTACCACTAGAAGGTGCAGCTCCATTGTTATGTGCTGGATTAACAGTTTATAGTCCAATGATTTATCATGGATTGTGTGAAAGTGGACAACATTTGGGTATTGTTGGGTTAGGTGGACTTGGTCATGTTGCAGTCAAGTTTGCTAAGGCTTTTAACATGAAAGTTACTGTGATAAGTACTTCTCCTAGAAAGAAAGAGGAAGCTTTGGAAAGACTTGGTGCTGATTCTTTCTTGCTtatcaatgatcaacaacaaATACAGGAAGCGAAGGACACAATGGATGGCATCATAGACACAGTTTCAGGCCCTCACGCACTCCACCCATTGGTTGATATGTTGAAGACATGtggaaaattgattttagttggTGCATCAATTACACCTCCAGTCTTGCCATACATGTCTTTGATGTTTGggAGGAAGATAATTGCTGGTTGTGCTGGTGGAGGAATGAAAGAGAGCCAAGATATGATTAATTTTGCAGCAAAGCACAATATCATAGCAGATATTGAAGTGATTTCTATGGATTATGTGAACACTGCTTTTGAGAAACTTGCAAAGAATGATGTTAAATACAGATTTGTCATTGATGTGGCAAACACTCTTAATGTCTCTCATattgattaa 864 0.3623 MDVNHSFQTENVILPTWLGVGPICGSCGTCSNCSKGWESYCPKTIATYNSLDYDGSTTYGGYSNKIVVNENYAIIIPKGLPLEGAAPLLCAGLTVYSPMIYHGLCESGQHLGIVGLGGLGHVAVKFAKAFNMKVTVISTSPRKKEEALERLGADSFLLINDQQQIQEAKDTMDGIIDTVSGPHALHPLVDMLKTCGKLILVGASITPPVLPYMSLMFGRKIIAGCAGGGMKESQDMINFAAKHNIIADIEVISMDYVNTAFEKLAKNDVKYRFVIDVANTLNVSHID 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01321 287 Pfam Zinc-binding dehydrogenase 118 241 IPR013149 -
Tsu05g01321 287 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 18 282 - -
Tsu05g01321 287 Gene3D - 91 247 - -
Tsu05g01321 287 PANTHER ALDEHYDE REDUCTASE 18 282 - -
Tsu05g01321 287 CDD CAD1 19 276 - -
Tsu05g01321 287 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 245 IPR036291 -
Tsu05g01321 287 SUPERFAMILY GroES-like 20 109 IPR011032 -
Tsu05g01321 287 Gene3D - 18 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01321 Tsu-Chr5 12027412 12031337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01321 18 282 Monolignol Biosynthesis Gene Families AT4G37990 61.132 2.02e-99 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01321 - - gmx:100801089 359.377