Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu05g01319 ATGTCAAAGAATGAATGGTACAATACCAACTATCCATTTGTTCCCGGGCATGAGCTTGTGGGTGTAGTAACAGAGGTGGGAAGTAAAGTAGAAAAATTCAAAGTTGGAGACAAAGTAGGTGTGGGCTACGTGATTGATTCATGTCGATCGTGCCAAAATTGCGACGACAATCTTGAGAATTACTGCCCAAAATATACAGTTACATGTGGTGCCAAGTATCGCGATGGCACCATCACATATGGAGGTTATTCTGACTCAATGGTTGCGGACGAGCATTTTGTCATCCGCATCCCTGATAACTTACCTCTTGATGTTGCCGGTCCTCTCCTCTGTGCGGGTGTCACAGTATATAGTCCACTTAAATATTTTGGACTCGACAAACCCGGGCTTCATATAGGTGTTGTTGGTCTTGGTGGACTTGGTCATATGGCTGTTAAATTTGCCAAAGCTTTTGGTGCTCGTGTCACGGTAATTAGTACATCGCCTAACAAAGAAGCGGAAGCATTAGACCACTTAGGAGCTGACTCGTTTATAATAAGTCGCGATCCGAATCAAATGCAGacagCAATAGGCACTATGGATGGTGTTATTGACACAGTTTCAGCTGGTCATGCTCTTTTACCAATGATTGGTTTATTGAAAACTAATGGAAAGCTTGTAATGCTTGGTGTTATAGTAAAGCCTCTTGAGCTTCCTGAATATGCTTTACTTGCAGGGAGGAAATTAATTGGCGGGAGTACGGTTGGAGGAATTAAGGAGACTCAAGAAATGATCGATTTTGCTGCCAAACATGGTGTTAAACCTGATATCGAGATTGTTCCTATTGATTATGTCAACACAGCAATGGAGCGTCTCGCTAAAGCAGATGTGAAATATCGATTTGTGATTGATATTGGAAACACACTGAAAGAAAGTTCTTAA 921 0.4169 MSKNEWYNTNYPFVPGHELVGVVTEVGSKVEKFKVGDKVGVGYVIDSCRSCQNCDDNLENYCPKYTVTCGAKYRDGTITYGGYSDSMVADEHFVIRIPDNLPLDVAGPLLCAGVTVYSPLKYFGLDKPGLHIGVVGLGGLGHMAVKFAKAFGARVTVISTSPNKEAEALDHLGADSFIISRDPNQMQTAIGTMDGVIDTVSAGHALLPMIGLLKTNGKLVMLGVIVKPLELPEYALLAGRKLIGGSTVGGIKETQEMIDFAAKHGVKPDIEIVPIDYVNTAMERLAKADVKYRFVIDIGNTLKESS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu05g01319 306 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 1 305 - -
Tsu05g01319 306 Gene3D - 112 268 - -
Tsu05g01319 306 PANTHER ALDEHYDE REDUCTASE 1 305 - -
Tsu05g01319 306 SMART PKS_ER_names_mod 3 296 IPR020843 GO:0016491
Tsu05g01319 306 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 16 30 IPR002328 GO:0008270|GO:0016491
Tsu05g01319 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 267 IPR036291 -
Tsu05g01319 306 SUPERFAMILY GroES-like 4 129 IPR011032 -
Tsu05g01319 306 CDD CAD1 1 297 - -
Tsu05g01319 306 Pfam Zinc-binding dehydrogenase 139 262 IPR013149 -
Tsu05g01319 306 Gene3D - 2 298 - -
Tsu05g01319 306 Pfam Alcohol dehydrogenase GroES-like domain 4 96 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu05g01319 Tsu-Chr5 11978568 11980674 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu05g01319 1 303 Monolignol Biosynthesis Gene Families AT4G37990 68.317 5.40e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu05g01319 - K23232 gmx:100809071 491.886